Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2221 ATGGCACCAGATCGACCAGGAAGAAAAGGTCCACCATTAACCTGGGCCCAGAGGCTCAAAATAGCAGTTGATGTGGCAGGTGGCCTTAACTATCTCCACTTTGATCGTGCTGTTCCTCATGGGAACCTTAAAGCAACAAATGTGCTGTTAGATATGCCGGATTCGAATGCAAGAGTTGCTGATTATTGCCTCGACCGGCTTATGATTCAGGCCGTTACTACTGAACAGATTCTTGATGCTGGGGTTTTGGGATATCGTGCACCGGAGCAGAGGATCAGAATGTTGGATGCTGTGTTGATGCCAGAAATGGGGAATCCAATAGCAGAAAAGGGAATGAAGGATTTCCTAGGAATAGCTCTGCAATACATTCGGTCTGTTTTTGAGAGGCCTGCTATCAAGACTATAAATGAAGACCTTTCATCTATATAG 429 0.4545 MAPDRPGRKGPPLTWAQRLKIAVDVAGGLNYLHFDRAVPHGNLKATNVLLDMPDSNARVADYCLDRLMIQAVTTEQILDAGVLGYRAPEQRIRMLDAVLMPEMGNPIAEKGMKDFLGIALQYIRSVFERPAIKTINEDLSSI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2221 142 Gene3D Transferase(Phosphotransferase) domain 1 5 99 - -
Mibi03g2221 142 Pfam Protein tyrosine and serine/threonine kinase 11 75 IPR001245 GO:0004672|GO:0006468
Mibi03g2221 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2221 142 PANTHER OS07G0626500 PROTEIN 92 142 - -
Mibi03g2221 142 SUPERFAMILY Protein kinase-like (PK-like) 9 94 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2221 Mibi-ChrMibi03 58589285 58589877 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2221 9 89 Receptor kinase-like Gene Family AT3G51740 48.193 1.52e-17 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi03g2221 PK_Tyr_Ser-Thr 1.1e-07 CL0016