Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2219 ATGGACAGACGCGAATACAGTCATGGCGGCTACAGGGGAGGCCAAAGAGGCCGTGGAAGAAGACAACCCTATAATGACGATGATGATCATTCTGCTTCTGGAGGAAGAGGCCAAAGAGGAAGGCACAATGATGATGGTTCCCGAGTGTCATCTGGTGGACATGCTCATGGCGGGAGATCTTGGGCGGACATGCTGAAGAAATCCCCTCAATCTGCTGTTTCTGCTCCACACCCTGTTCTTGTATCGGAACGACATCAAATTTCTCGACCGGTTCCAAGCTGTCAAACTGAGGAGATGGAAGGTAGGCTTTTGCCCGTCCCTAGGCCTGCTGACAAGGGTCATTTGTCAGCAACAAGTAGCCGCCTCCGAGTGAACCACTTTCCTGTAGATTTTTCTCGTGATTGTGAAATCATGCATTACAATGTTGTTGTGGAGCGCTACCCAAAAGCCGATCCTGGTACCGATCAACCTCATAGTATACCAAATTCTATCCTCTCTAAGGTTAGGCGTGCATTCTTTTCAAAGTACCCGTTGCCAGATGGGACGACAGCGTATGATGGAGGAAATATCGTTTACAGTCTAGAAACTTTGACGCTACGACCTTTCCATGTGACTATCCCGGGAGGAAATGAGGGTAAACAAGATTCATATAGCGTCAGCTTAGCATATGTGAATACACTTGAGTACAGGAAGTTGAGGGAATTCCTCAATAATAAGGAGGGGCCTATGTCAGCAACCGAAGAAGTTTTGCAAGCCATGCGTTTAGTATTCAAGAAAAGTCAAACCTCTCTCTCTGTTGGACGTGGCTTCTATAATCTAAAGGATCCTTCAGAAGATAATGATATTGGCAGTGGCTTAATTGCACTAGAGGGGTTCCGACAAAGTTTGAAGCCAACATATCAAGGGTTGTCCCTATGCCTGGACTACTCCGTCTTACCTTTTGCAAAGCCAATCGAAGTCTTTGATTTTTTACTTGAGAATATTTCTGGTTATCATGGCCCTCAGGATTTTCAACGTTGCAGGAAACCCATTGAGGATAAATTGATTGGTTTAAAGGTAGAGGTGACATACCGTAGTCCCAGACAGAAATACACGATTGTAGGGTTATCAGAGAAAAACACAAAGGACATCACCTTTCCCAGAAAACGGTCGAATGGCTCTCAGGAAACCTCAATTACTGATTATTTCTTTGACAAATACGAACGGCATATTGAATACCAAGACATTCCCTGTTTAGATTTTGGGAAAGGTGTCTTTGTGCCAATCGAGTTTTGCAGTTTAATAGAGGGTCAGAGATATCCCAACAAGAAGATGGATACAGTTGCTTCCGACAACTTGAAAGAAAAGTCAGTGATTCACCCAGCAATGAGACACGGTAAAATACAAGAGTTAGTGCAAACAAGTTATGGATGTGGCGGTGGTATTGTTAAAAACTTTGGAATGGAAGTCAACACTACCCTGACCAGAGTTTCAGGACGGATTATTCCGCCACCAGATTTGAAAGCACGATATCAAAGTGGCCAGAAAAAAACTATTAAGTGCCATATGAGGAACTATCGATGGAATCTACGTGATAGCTGCGTGATGGAAGGTAAGCTGGTCGAGCGTTGGGGCTTAATTGACTTTACAAGCGAAGAGACAGGAAAGTTCAAATTAAATTGCAGGTCATTCATTAACAAGCTCAAGGAAAAATTTGGAAGTTTGGGCATTGGCATGAATGATCCTCTTTACATTAGACCATCTTCCACGGATGTACTTGCAAGGCATGATTTGCTGGAACGTTTACTTATAGAAGTGAAACAGAAAGTGGACAAAGCTGATCAAGTAGCACAATTTATTCTGTGTGTCATGCCTCGGAGACATGATGGTTACAAGACGCTGAAGTGGATTTCAGAGACCAAGGTTGGTGTAGTAACACAGTGCTGTTTAGTTAAAACTGTGAATGATGGGAAAGATCAGAGTTTGACAAATCTGGCGCTAAAGATCAACGCAAAACTTGGAGGAAGTAACGTTGAGCTTGAAAAGGGGCTCAGTCATTACTTTGCTTGTGATAGGGAGCACGTAATGGTCGTTGGTGCTGATGTTAATCACCCCGGGGCTGGAGACGGTAGGAGTGCATCCATTTCGGCCGTGGTAGGAACTATGAACTGGCCAGCAGCGAATTGCTATGCTGCACGTGTCAGCCATCAGAGACATCGTGTGGAAAGAATACTGAATTTCGGAAGAGTTTGTCTGGATCTTGCTGACTGCTACAACAGGTTCAATGGGAGGAGACCAGATAAAATCATTATTTTCCGTGATGGTGTCAGTTCTGGTCAGTTTGATATGGTTCTCAATGAAGAACTGCAAGATCTGAAAAATGTTTTCAAAATGGTAGAGTATAATCCAAGTATAACTTTGATTGTTGCACAGAAGAGGCACCTTACAAGATTTTTTTTAGAGGGTGTTAGTCCTACAGCAGTTCAGAATGTGCATCCTGGCACAGTGGTGGATACCGTTGTGGTTCACCCTTTTGAGTTTGACTTCTATCTGTGCAGCCACTATGGAAACTCAGGAACCAGCAAGCTAACACACTACCACGTGCTGTGGGATGAACACCACTTTACATCTGCTAAAATTCAGAGGCTTATATATGATATGTGCTACACCTTTGCTAGGTGTACGAGCCCCATATCTCTTGTCCCTCCGGTGTACTATGCAGATCTTGTAGCATCTCGGGGACGCCATTATTATGATTCAAAGGTTAAGTTCGAAGGTCCTCCACCTGGTCAGCAAGAACCTTTTTATGCTCATGTCTTCGAGCTGCATGAGCAGCTGAAAGACGTGATGTTCTTCGTCTGA 2841 0.4396 MDRREYSHGGYRGGQRGRGRRQPYNDDDDHSASGGRGQRGRHNDDGSRVSSGGHAHGGRSWADMLKKSPQSAVSAPHPVLVSERHQISRPVPSCQTEEMEGRLLPVPRPADKGHLSATSSRLRVNHFPVDFSRDCEIMHYNVVVERYPKADPGTDQPHSIPNSILSKVRRAFFSKYPLPDGTTAYDGGNIVYSLETLTLRPFHVTIPGGNEGKQDSYSVSLAYVNTLEYRKLREFLNNKEGPMSATEEVLQAMRLVFKKSQTSLSVGRGFYNLKDPSEDNDIGSGLIALEGFRQSLKPTYQGLSLCLDYSVLPFAKPIEVFDFLLENISGYHGPQDFQRCRKPIEDKLIGLKVEVTYRSPRQKYTIVGLSEKNTKDITFPRKRSNGSQETSITDYFFDKYERHIEYQDIPCLDFGKGVFVPIEFCSLIEGQRYPNKKMDTVASDNLKEKSVIHPAMRHGKIQELVQTSYGCGGGIVKNFGMEVNTTLTRVSGRIIPPPDLKARYQSGQKKTIKCHMRNYRWNLRDSCVMEGKLVERWGLIDFTSEETGKFKLNCRSFINKLKEKFGSLGIGMNDPLYIRPSSTDVLARHDLLERLLIEVKQKVDKADQVAQFILCVMPRRHDGYKTLKWISETKVGVVTQCCLVKTVNDGKDQSLTNLALKINAKLGGSNVELEKGLSHYFACDREHVMVVGADVNHPGAGDGRSASISAVVGTMNWPAANCYAARVSHQRHRVERILNFGRVCLDLADCYNRFNGRRPDKIIIFRDGVSSGQFDMVLNEELQDLKNVFKMVEYNPSITLIVAQKRHLTRFFLEGVSPTAVQNVHPGTVVDTVVVHPFEFDFYLCSHYGNSGTSKLTHYHVLWDEHHFTSAKIQRLIYDMCYTFARCTSPISLVPPVYYADLVASRGRHYYDSKVKFEGPPPGQQEPFYAHVFELHEQLKDVMFFV 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2219 946 SUPERFAMILY PAZ domain 314 467 IPR036085 GO:0005515
Mibi03g2219 946 MobiDBLite consensus disorder prediction 1 99 - -
Mibi03g2219 946 Pfam PAZ domain 338 442 IPR003100 GO:0005515
Mibi03g2219 946 ProSiteProfiles Piwi domain profile. 612 912 IPR003165 GO:0003676
Mibi03g2219 946 Pfam Piwi domain 612 911 IPR003165 GO:0003676
Mibi03g2219 946 MobiDBLite consensus disorder prediction 19 49 - -
Mibi03g2219 946 CDD Piwi_ago-like 475 911 IPR045246 -
Mibi03g2219 946 Gene3D - 682 946 IPR036397 GO:0003676
Mibi03g2219 946 SUPERFAMILY Ribonuclease H-like 607 912 IPR012337 -
Mibi03g2219 946 SMART Piwi_a_2 612 912 IPR003165 GO:0003676
Mibi03g2219 946 Pfam Argonaute linker 1 domain 265 314 IPR014811 -
Mibi03g2219 946 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 119 913 - -
Mibi03g2219 946 Pfam N-terminal domain of argonaute 121 253 IPR032474 -
Mibi03g2219 946 Gene3D paz domain 313 433 - -
Mibi03g2219 946 CDD PAZ_argonaute_like 317 428 - -
Mibi03g2219 946 Gene3D - 494 675 - -
Mibi03g2219 946 ProSiteProfiles PAZ domain profile. 347 429 IPR003100 GO:0005515
Mibi03g2219 946 SMART DUF1785_2 264 317 IPR014811 -
Mibi03g2219 946 SMART PAZ_2_a_3 322 451 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2219 Mibi-ChrMibi03 58577161 58583219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2219 71 919 Eukaryotic Initiation Factors Gene Family AT1G48410 32.774 1.45e-128 412