Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2160 ATGTGTGCGCGCGCGCGTGTGTTTGCAAGTGACTACTCCAAAGAAGTGAGGAAAGCAAAAATGGCTTTAACAAGTGATGATCATAAGCAGAAGGGTTATGAACAACACTTTTCTGATTCATCTAACCATTCTTCCATCATGAGACAACTTAGCTCATCATCACATAGCAAATCAGTGATCTCAAAAAGAAGATCTAGAGCTTCCAAGAAAACCCCAGTCACCCTCCTCAAAGCAAACTCCTCCAACTTTAGGGCACTTGTCCAACAATTCACTGGCTGCCCTACCACTCCTTTGTCCCTTGCTGTCCCTTTCAAAGGACCCATCACCCTTAACTTCCAACGAGGAATCCGAGAAATGCAGACTTCTCTTCATCATCATCACAACACATCAAGCACAGCCACTAGGCCAAGTTCTAATGAAGAAGAAGAACAAGATCATCATCATCATCTTCAGCATCTTCATAATAATAGCAATAATAACCAAGTTGTTCATGTTATTTTTCACCAGAATCAGCAGATAGAAAGTAATGGTGAATCTTCTTCTTCTTCTGTTGTTTCTGCTTTATCTTCATCAAGTGGCCTGAAAGTCTCTAATAATGATCTTTCTACTATTGACTTTGATGGACTCATGGATGATTTTAGTTTGCACGACCTCATTGACATGAACAATGCCTTCTCTAATGATTTGGGTTCTTTTCTTTATATGATTGCTAGCTTTACCACTGCCAAGGTGTTCACTGGAATGGATTGTGGGGAATTTCTAAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTCACCAAAGCAATAGTAGCATATGCACGTCATTTTCATTTCTTTGATGAATCCTCTGCAACTACTGGTAGCAAAGATGATGCCAATGAGTTGAAGTCAGGTGGCTTTATAATGAAATTAATGGAGGAAAGCGGCATAGATATTCCAACTGAAGTGGAAAATTTTGTGATCAAGCTGGAAGAAAATGCAAAGACAGGGATTCCGGTTGTATATGGAAAGGCTGATGTTGTTCGTTCATTCCAGAAAGATGGAAGCATAGTTGCAATGGTGGGTGATGGTATCAATGGCTCTCCCGCATTGGCCGTTGCCGATGTTGGTATCGCCATTGGGGCTGGGACTGATATTGCCATAGAAGCTGCTGATTATGTGTTGATGAGAAACAATTTGGAAGATGTAATCACTGCCATTGATCTCTCTAGGACAATCTTCTCTCGCATTCGGTTGAATTATTTCTTTGCAATGGCCTACAATGTGGTTGCCATACCAGTTGCTGCTGGGGTTCTCTATCCTTCACTTGGGATCAAGCTGCCTCCATGGGTAGCCGGAGCCTAG 1353 0.4213 MCARARVFASDYSKEVRKAKMALTSDDHKQKGYEQHFSDSSNHSSIMRQLSSSSHSKSVISKRRSRASKKTPVTLLKANSSNFRALVQQFTGCPTTPLSLAVPFKGPITLNFQRGIREMQTSLHHHHNTSSTATRPSSNEEEEQDHHHHLQHLHNNSNNNQVVHVIFHQNQQIESNGESSSSSVVSALSSSSGLKVSNNDLSTIDFDGLMDDFSLHDLIDMNNAFSNDLGSFLYMIASFTTAKVFTGMDCGEFLKLVASAEASSEHPLTKAIVAYARHFHFFDESSATTGSKDDANELKSGGFIMKLMEESGIDIPTEVENFVIKLEENAKTGIPVVYGKADVVRSFQKDGSIVAMVGDGINGSPALAVADVGIAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRTIFSRIRLNYFFAMAYNVVAIPVAAGVLYPSLGIKLPPWVAGA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2160 450 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 340 438 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi03g2160 450 Pfam VQ motif 72 97 IPR008889 -
Mibi03g2160 450 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 240 336 - -
Mibi03g2160 450 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 243 340 IPR023299 GO:0000166
Mibi03g2160 450 MobiDBLite consensus disorder prediction 22 36 - -
Mibi03g2160 450 Gene3D - 307 425 IPR023214 -
Mibi03g2160 450 Gene3D - 237 301 IPR023299 GO:0000166
Mibi03g2160 450 MobiDBLite consensus disorder prediction 37 58 - -
Mibi03g2160 450 PRINTS P-type cation-transporting ATPase superfamily signature 357 376 - -
Mibi03g2160 450 PRINTS P-type cation-transporting ATPase superfamily signature 380 392 - -
Mibi03g2160 450 MobiDBLite consensus disorder prediction 123 151 - -
Mibi03g2160 450 MobiDBLite consensus disorder prediction 22 71 - -
Mibi03g2160 450 SUPERFAMILY HAD-like 338 438 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2160 Mibi-ChrMibi03 57490604 57494828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2160 237 450 Primary Pumps ATPases AT5G44790 46.865 3.71e-64 221