Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2159 ATGTGTGTGCGTGTGTTTGCAAGTGACTACTCCAAAGAAGTGAGGAAAGCAAAAATGGCTTTAACAAGTGATGATCATAAGCAGAAGGATTATGAACAACAGTTTTCTGATTCATCTAATCATTCTTCCATCATGAGACAACTTAGCTCATCATCAAATAGCAAATCAGTGATCTCAAAAAGAAGATCTAGAGCTTCCAAGAAAACACCAGTCACCCTCCTCAGAGCAAACTCCTCCAACTTTAGGGCACTTGTCCAACAATTCACTGGCTGCCCCACCACTCCTCTTTCTCTTGGTGTCCCCTTTAAAGGACCCATCACCCTTAACTTCCAAAGAGGAATCCGAGAAATGCAGAGTTCTCTTCATCATCACAACACATCAAGCACAACCACTAGGCCAAGTTCTTACGAGCAAGAAGAACAAGATCATCATCATCATCATCTTCATGATAACAGCAATAACCAGGTTGTTCATGTTCGTTTTCACCAGAATCAGCAGATAGAATCACAGGACGTATCAGATCATCATCAGCAAATAATTAATGTTGTTGATGATAATGATAATGACGACGACGACGACTGTGTGATGATGATGGAGAGGATTACAAGTAATGGTGAATGTTCTTCTTCTGTTGTTTCTGCTTCGTCTTCATCAAGTGGCCTGGAAGTCTCTCATCATGATCTTTCTACTATTGACTTTGATGGACTCATGGATGATTTTAGTTTGCACGATCTCATTGACATGAACAATGCATTCTCTAATGATTTGGGTTATTTTCTGTACATTGCTGGGGCTCTGGGAGCTTACCCCGAAGAATGGTTGCCAGAAAATGGAAATCATTTTGTTTTTGCTCTCATGTTTTCAATATCTGTAGTGGTGATTGCATGTCCCTGTGCATTGGGCTTGGCAACACCAACAGCGGTCATGGTAGCTACAGGGGTTGGGGCTAACAATGGGGTGTTGATCAAAGGAGGAGACGCCTTGGAAAGGGCTCAGATGGTGAAGTACGTGATATTTGACAAAACTGGCACTTTAACTCAGGGAAAAGCTAGCTTTACCACTGCCAAGGTGTTCACTGGAATGGATCGTGGGGAATTTCTAAAATTGGTGGCTTCTGCAGAGGTTGGTAATAGGAAATTAATGGAGGAAAGCGGCATAGATATTCCAACTGAAGTGGAAAATTTTGTGATCGATCTGGAAGAAAATGCAAAGACAGGGATTCTGGTTGCATATGGTGATGCGCTTACAGGAGTTATAGGGGTTGTAGACCCAATGAATGCGCTAATTGAATAA 1293 0.4192 MCVRVFASDYSKEVRKAKMALTSDDHKQKDYEQQFSDSSNHSSIMRQLSSSSNSKSVISKRRSRASKKTPVTLLRANSSNFRALVQQFTGCPTTPLSLGVPFKGPITLNFQRGIREMQSSLHHHNTSSTTTRPSSYEQEEQDHHHHHLHDNSNNQVVHVRFHQNQQIESQDVSDHHQQIINVVDDNDNDDDDDCVMMMERITSNGECSSSVVSASSSSSGLEVSHHDLSTIDFDGLMDDFSLHDLIDMNNAFSNDLGYFLYIAGALGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKASFTTAKVFTGMDRGEFLKLVASAEVGNRKLMEESGIDIPTEVENFVIDLEENAKTGILVAYGDALTGVIGVVDPMNALIE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2159 430 SUPERFAMILY HAD-like 326 365 IPR036412 -
Mibi03g2159 430 ProSitePatterns E1-E2 ATPases phosphorylation site. 340 346 IPR018303 -
Mibi03g2159 430 MobiDBLite consensus disorder prediction 20 34 - -
Mibi03g2159 430 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 340 421 IPR023299 GO:0000166
Mibi03g2159 430 Pfam E1-E2 ATPase 278 317 - -
Mibi03g2159 430 Gene3D - 371 423 IPR023299 GO:0000166
Mibi03g2159 430 Gene3D - 247 355 - -
Mibi03g2159 430 MobiDBLite consensus disorder prediction 120 149 - -
Mibi03g2159 430 MobiDBLite consensus disorder prediction 120 135 - -
Mibi03g2159 430 Pfam VQ motif 70 95 IPR008889 -
Mibi03g2159 430 MobiDBLite consensus disorder prediction 35 59 - -
Mibi03g2159 430 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 375 425 - -
Mibi03g2159 430 MobiDBLite consensus disorder prediction 20 69 - -
Mibi03g2159 430 SUPERFAMILY Calcium ATPase, transmembrane domain M 259 330 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2159 Mibi-ChrMibi03 57454673 57457772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2159 375 426 Primary Pumps ATPases AT5G44790 59.615 5.17e-13 69.3