Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2148 ATGGCTGAATCTCCCTCTCCTTCTCCTTCCTCCATGATCGCCACCACCGTCCTCCACCATCCCTCGGCCTTCGATCTCACTGTCCTTGTCGCCGCCATTGTTTGCGCCTTTCTCTGCGCCCTTGGCCTCAACACCATGCTCCACTGCGTCTTCCAATGCGCTGTCACCGAGCCTCTCCAATGGATAGCCTCCCGGCGATTCAATTCTGGCCTCAAGAAGAAAGACATGGTTGCTCTTCCTACTTCCACTTATTTTACCAATCCTACCACTTCTTCTTCTTCTACTAATTCTAATTCTAATTCTAATTCATCTTCTACTACTACTACTACTCCAACTTCTGCTTCTAATTGTGCAATTTGCTTAGCGGATTTTAGCGACGGGGAGAGAATTAGATTTCTGCCAAAGTGTAGTCACACATTTCATGTGGCTTGTATCGATAAGTGGTTGCTTTCTCATTCATCTTGCCCAACTTGCCGCCATTTTCTGAAATCCTCCTCTGATTCACTTAACACTACTCTGCATCTTGTTATTTCATAA 537 0.46 MAESPSPSPSSMIATTVLHHPSAFDLTVLVAAIVCAFLCALGLNTMLHCVFQCAVTEPLQWIASRRFNSGLKKKDMVALPTSTYFTNPTTSSSSTNSNSNSNSSSTTTTTPTSASNCAICLADFSDGERIRFLPKCSHTFHVACIDKWLLSHSSCPTCRHFLKSSSDSLNTTLHLVIS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2148 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 164 IPR013083 -
Mibi03g2148 178 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 22 162 - -
Mibi03g2148 178 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Mibi03g2148 178 SMART ring_2 117 158 IPR001841 -
Mibi03g2148 178 MobiDBLite consensus disorder prediction 87 113 - -
Mibi03g2148 178 SUPERFAMILY RING/U-box 116 165 - -
Mibi03g2148 178 Pfam Ring finger domain 116 159 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2148 Mibi-ChrMibi03 57252719 57253255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2148 4 162 C3H Transcription Factor Family AT2G17450 40.237 5.59e-34 117