Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2135 ATGAGGTTATTCTCAAAATGTAGATTTTTCAAGGATTGTCCACATCCAGATGAAAACCAACGACGCCAGTTAGGCAGAGAGCTGGGGCTGAACACAAGACAAATCAAGTTCTGGTTTCAGAATAAGAGAACCCAAACAAAGACTCAGAATGAGAGAGCAAATAATGCTATGCTTCGGGCTGAAAATGAAAGGATGAGATGTGAGAATATAGCATTCAGAGAGGCACTGAAGGACATGATGTGCCCTTCTTGTGGGGGTCATCAACCCTTTGGGGAAGATGAACTTAGCCTTCATATCCAACTGCTGCAGCAAGAGAATATCCTACTCAAAAAAGAGTATGAGAAAATATCAAACATTCTTGCGACCTGCGTTGGGAAACCAGTATCTGCAGTGATAGATTCTTCTGTGGATGGTTCCTCCGCCGCCGGATCTCCACCACTGCCGCCGGTGGCTCCACCAGCACCTGTGGCTCTATCACCTGGAAATTCCCCTAACCTAGAGAGTATTGGAAGTCCAAGTCTTGACTTTGACTTAGGTTCTGCCATTACATTCTCTGATGACAGCATGCTGCCATCCTTAATGGGAGATGTGACAGATGTGGAGAAGGATTTGATGTTAGATGCTGCTAATAATGCCATGAATGAGTTAATGAAGCTTATGCCTATTGATGAGCCCTTGTGGATAAAGACTTCAGTTGGTGGACAGTTTGTTCTTCATCGTGAGAGCTATGCAAAGTTGTCTCCTAGGGCTAATCACTTCAGAAGTTGCAGTGCTCGTGAAGAAGCTTCCAAAGATTCACGAATTGTTTGGATGAATGCCGTGCAATTGGTTGACATGTTCTTAGATCCGGACAAGTGGGTCAATGTGTTCCCAACAATTGTTAGAAAAGCTGAAACACTTGAAGTGCTTAATGTTGGATCACCAGGAAACCGATCTGGAGCTTTGCAGCTGATGTACGAAGAGATGCACGTAATGTCACCATTGGTGGAAGCTCGTGAGTTCTGCTTCGTTCGCTACTGTAAACAAGTAGAGGCAGGCGTGTGGGTGATTGCTGACGTGTCATTCGATTCCTTGAGAGACAACATCCCTATTTCTCGTACTTGGAAGTTCCCTTCTGGTTGCATGATCCATGACATGCCCAATGGCTTCTCCAAGGTTACTTGGATTGAACATATAGAAGTGGATGAGAAAACCCAAACTCACAGGCTGTTCAGAGACCTTGTTTCGGACAATCTTGCTTATGGAGCTGAACGATGGGTGGTTACACTTCAAAGAATGTGCGAACGACTTATGTTTACCTTGGATCGTAATATTCCAATCGATGAAGCTAGAGAAGTGCTAAGTTGTGGAGGTGGTGGGAGGAGGAACGTGATGGAGCTTAGTAACAGAATGGTGAAGGACTTTTGTGAAGCAATGAGCATGACAAAGAAGGAGTTCCCTAGTTTATGTGAGACTAAAAATGGTGGGGTCAGGCTTTCTGTGAGGAGGAACAGAGATAGGAGTCAGCCAGATGGAGTGATTGTGACTGCTTCAACATCTTTATGGCTTCCTCTTATGCATCACAGAGTGTTTGAGTTCCTCATTGATGACAACAGGAGAGCTCAGTGGGATGTTCTTTCCCGTGGAAACTCACATATTCATCAAATCGGCCGCATCTCCAATGGATCCCATCCTAGCAATTGTACCAAAATTATCCAGCCTTTGATTCCCAATAGTGAGAAACATATGATCATTCTCCAAGAGACTCATACTGACTGTTTGGGGTCAATGCTTGTGTATGCTCCCATTGACATGCCACTCATTAACTTATGTGTGAGGGGAATAGACACTCGCCTTATCCCCATCCTTCCGGCCGGCTTGGTCATCTCTAGCGACGGTCACCGGCGTCTTCCCGGCCCGTTGTCCGCCGGGGAATCTAGCGGCAGCTCATCCTCATCCGGCTCAAATGGTGCTTCATCTGCACCACCTTCTGAAGGATGCCTTCTCACTATGACTTTCCAGGTTCTGGTTTGCAAGAATGATCCCAACTCGGTGAGTCAACTCAACGTTGAAACTGTGGCAATTATCAACTCCCTCATCACCTCAACTGTTCACAACATTAAGGTGGCTCTCAACTGCGCTGATGTTGATTAA 2133 0.4566 MRLFSKCRFFKDCPHPDENQRRQLGRELGLNTRQIKFWFQNKRTQTKTQNERANNAMLRAENERMRCENIAFREALKDMMCPSCGGHQPFGEDELSLHIQLLQQENILLKKEYEKISNILATCVGKPVSAVIDSSVDGSSAAGSPPLPPVAPPAPVALSPGNSPNLESIGSPSLDFDLGSAITFSDDSMLPSLMGDVTDVEKDLMLDAANNAMNELMKLMPIDEPLWIKTSVGGQFVLHRESYAKLSPRANHFRSCSAREEASKDSRIVWMNAVQLVDMFLDPDKWVNVFPTIVRKAETLEVLNVGSPGNRSGALQLMYEEMHVMSPLVEAREFCFVRYCKQVEAGVWVIADVSFDSLRDNIPISRTWKFPSGCMIHDMPNGFSKVTWIEHIEVDEKTQTHRLFRDLVSDNLAYGAERWVVTLQRMCERLMFTLDRNIPIDEAREVLSCGGGGRRNVMELSNRMVKDFCEAMSMTKKEFPSLCETKNGGVRLSVRRNRDRSQPDGVIVTASTSLWLPLMHHRVFEFLIDDNRRAQWDVLSRGNSHIHQIGRISNGSHPSNCTKIIQPLIPNSEKHMIILQETHTDCLGSMLVYAPIDMPLINLCVRGIDTRLIPILPAGLVISSDGHRRLPGPLSAGESSGSSSSSGSNGASSAPPSEGCLLTMTFQVLVCKNDPNSVSQLNVETVAIINSLITSTVHNIKVALNCADVD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2135 710 MobiDBLite consensus disorder prediction 145 159 - -
Mibi03g2135 710 SMART START_1 207 429 IPR002913 GO:0008289
Mibi03g2135 710 CDD START_ArGLABRA2_like 202 428 - -
Mibi03g2135 710 Pfam Homeodomain 8 47 IPR001356 GO:0003677
Mibi03g2135 710 Gene3D - 7 48 - -
Mibi03g2135 710 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 8 705 IPR042160 -
Mibi03g2135 710 ProSiteProfiles START domain profile. 198 432 IPR002913 GO:0008289
Mibi03g2135 710 CDD homeodomain 8 50 IPR001356 GO:0003677
Mibi03g2135 710 Gene3D - 207 409 IPR023393 -
Mibi03g2135 710 MobiDBLite consensus disorder prediction 636 656 - -
Mibi03g2135 710 Coils Coil 99 119 - -
Mibi03g2135 710 SUPERFAMILY Bet v1-like 199 429 - -
Mibi03g2135 710 SUPERFAMILY Homeodomain-like 8 54 IPR009057 -
Mibi03g2135 710 SMART HOX_1 2 53 IPR001356 GO:0003677
Mibi03g2135 710 ProSiteProfiles 'Homeobox' domain profile. 8 49 IPR001356 GO:0003677
Mibi03g2135 710 MobiDBLite consensus disorder prediction 631 656 - -
Mibi03g2135 710 Coils Coil 43 70 - -
Mibi03g2135 710 SUPERFAMILY Bet v1-like 453 678 - -
Mibi03g2135 710 MobiDBLite consensus disorder prediction 135 164 - -
Mibi03g2135 710 Pfam START domain 209 429 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2135 Mibi-ChrMibi03 57119647 57126199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2135 10 705 Homeobox Transcription Factor Family AT1G73360 42.076 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi03g2135 START 4.1e-36 CL0209