Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2130 ATGGTAGACCTTCCGAATTCAAATCGATCTTCGGAGCTCAGCCTAGAAGCTCTCACTCTCAGCAGCTCAACAAACCGAAGTTCCATGAGCAGCGAAAGCATCTGCAGCACAAGCTTCAGCCGCCTCTCCTTCGAACTCCTCCCTACCTCCTCCCCTGAAGAAACCAGCCTCTCCCTCAAACCTCACCGCTCGTCGGACTTCGAATACTCCGCCATTCGCTCCGCCACCTTCCGCCGCAAATCCCGCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCCAAGGCGACATCGGCACCGTCTACCTCTGTAAGCTCCGCAAGACTTCCCAAGACATCCAAAACGACAACGACGATGATGTCGTTTTGGAGGATAAGGATGGTGGTTGTTTGTATGCGATGAAGGTTGTGGATAAGGATGCGGTGGCGATGAAGAAGAAGTCCGAGAGGGCGGAGATGGAGAGGAGGATTTTGAAGATGCTTGATCATCCTTTTCTTCCTACTCTTTATGCTGAGTTTGAGGCTTCCCCTAACTTCTCTTGCATTGTTATGGAGTTTTGTTCTGGTGGTGACTTGCATTCCCTTCGCCATCAACAGCTCAACCATCGTTTCCCTCTTGAATCTGCTAGGTTTTATGCTGCAGAAGTATTGGTGGCATTGGAGTACCTTCACATGTTAGGAATCATATACAGAGATCTGAAACCAGAAAACGTGTTAGTCAGATCCGACGGTCACATCATGCTCTCAGATTTCGATCTCTCAATGTGCTCCGACGCAATCCCAGCCGTTGAATCCTCCTCCTCAGACTTCTCCCCAGACCCCTCATTCCCACACACCTTACCATACACCCGCACCCACACTAATAACCCCTCCCCCTTCTCCTGCCTCCCAAACCGGCTTTTCCGGTCCAAAAAAGTCCAAACCATCCATCCGAACCGCCTTTTCGTGGCCGAACCGGTCTCGGCCCGGTCCAGGTCCTTCGTCGGCACCCACGAGTACGTCTCGCCGGAGGTCGCCTCCGGCAATTCCCACGGCAACGCCGTCGATTGGTGGTCGTTCGGGATATTCATCTACGAGCTAATCTACGGTAGAACGCCGTTCGCCGCCGAGTCGAATGAGGCGACGCTCCGTGGGATTATTAAGAAGCCGTTGAGTTTTCCGGCCCACGCGCCTTCCGGCGGAGCGCTTGAGGTGCACGCGCGGGATCTGATAGCTTCTTTGTTGCATAAGGATCCGACCCGGAGGCTCGGGTCGAAGCGGGGGGCGGCGGAGGTGAAAAATCATGCGTTTTTTAAGGGGTTGAATTTTGCCTTGATAAGGATGATGACGCCGCCGGAGATTCCTGGTTTTAGGAGGAGGAATAAAACGATGTCGTTTGGTCAGGTGAAGAAGGGGACTGGTAGGAGACAACAGCAGCTACGGCCAACGTCGTCGTTTGACTACTTCTGA 1452 0.5372 MVDLPNSNRSSELSLEALTLSSSTNRSSMSSESICSTSFSRLSFELLPTSSPEETSLSLKPHRSSDFEYSAIRSATFRRKSRLTFRDFHLLRRIGQGDIGTVYLCKLRKTSQDIQNDNDDDVVLEDKDGGCLYAMKVVDKDAVAMKKKSERAEMERRILKMLDHPFLPTLYAEFEASPNFSCIVMEFCSGGDLHSLRHQQLNHRFPLESARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSMCSDAIPAVESSSSDFSPDPSFPHTLPYTRTHTNNPSPFSCLPNRLFRSKKVQTIHPNRLFVAEPVSARSRSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYELIYGRTPFAAESNEATLRGIIKKPLSFPAHAPSGGALEVHARDLIASLLHKDPTRRLGSKRGAAEVKNHAFFKGLNFALIRMMTPPEIPGFRRRNKTMSFGQVKKGTGRRQQQLRPTSSFDYF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2130 483 Gene3D Transferase(Phosphotransferase) domain 1 188 256 - -
Mibi03g2130 483 Gene3D Phosphorylase Kinase; domain 1 451 460 - -
Mibi03g2130 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Mibi03g2130 483 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Mibi03g2130 483 PANTHER FLIPPASE KINASE 1-RELATED 23 452 - -
Mibi03g2130 483 SUPERFAMILY Protein kinase-like (PK-like) 65 449 IPR011009 -
Mibi03g2130 483 FunFam protein kinase PINOID 188 256 - -
Mibi03g2130 483 Gene3D Transferase(Phosphotransferase) domain 1 323 450 - -
Mibi03g2130 483 ProSiteProfiles Protein kinase domain profile. 88 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2130 483 SMART serkin_6 88 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2130 483 Pfam Protein kinase domain 325 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2130 483 Pfam Protein kinase domain 127 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2130 483 MobiDBLite consensus disorder prediction 463 483 - -
Mibi03g2130 483 FunFam serine/threonine-protein kinase D6PK-like 323 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2130 Mibi-ChrMibi03 57054728 57056634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2130 20 483 AGC Kinase Gene Family AT2G34650 61.915 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi03g2130 Pkinase 4.2e-29 CL0016