Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2112 ATGAGACTCTCTTCAGCTGGTTTTACTCCTTCACCTCCGGAAGGAGAAAAGCGAGTTCTAGATTCTGAGCTATGGCATGCTTGTGCTGGCCCTCTTGTTTCCCTTCCAGCTGTTGGAAGCCGCGTCGTCTACTTCCCCCAAGGTCACAGTGAACAGGTTGCTGCATCAACCAACAAGGAGGTGGACGTCCATATTCCCAACTACCCAAGCTTACCTCCACAACTTATTTGTCAACTTCATAATTTGACTATGCATGCTGATGCAGAGACTGATGAAGTATACGCTCAGATGACCTTGCAACCTTTGAATCCTCAGGAACAAAAGGAGGCATACCTTCCAGCAGAGTTGGGCACTTCCAGTAAACAGCCAACAAACTACTTCTGCAAAACTTTGACTGCTAGTGACACAAGCACTCATGGGGGATTCTCTGTTCCTCGTCGCGCTGCTGAGAAAGTGTTTCCTCCATTGGATTTCTCTCAGCAGCCTCCTGCTCAAGAATTGATCGCACGGGACTTGCATGGTAACGAATGGAAATTCAGACATATCTTCCGGGGTCAGCCTAAACGACATCTACTTACAACAGGATGGAGTGTCTTTGTAAGTGCTAAGAGGCTTGTTGCTGGTGATTCTGTGCTGTTTATATGGAATGACAAGAATCAATTGCTTCTTGGTATTCGACGTGCAAATCGACCACAAACAGTGATGCCATCATCAGTGCTCTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCGCATGCAGCTGCAACAAACAGCCGTTTCACCATTTTCTACAACCCACGTGCTAGCCCATCAGAATTTGTCATACCACTAACAAAGTATGTTAAAGCTGTGTATCATACCCGAGTTTCAGTTGGCATGCGCTTTCGTATGTTGTTTGAAACGGAGGAATCAAGCGTCCGGCGATACATGGGCACAATCACCGGCATTAGTGACCTGGATACTGTGAGGTGGCCAAATTCACATTGGCGATCAGTTAAGGTTGGCTGGGATGAGTCCACAGCAGGAGATAGGCAACCTAGAGTATCCTTGTGGGAAATTGAGCCATTAACAACGTTTCCAATGTATCCTTCCCCTTTCCCTCTTAGGCTTAAACGACCATGGCCTCCTGGACTCCCTTCATTCCATGGTATGAAGGATGATGATTTGGGTATGAATTCTCCACTGTTTTTGGATAGAGGGCTTCAGTCTCTTAATTTCCCTGGAATTGGGGTTACTCCTTGGATGCAACCAAGGTTTGATCCGTCCTTTCTGAATTTGCAACCCGACATGTATCAAGCCATGGCTGCGGCTGCGCTTCAGGATATAAGGACCATAGATCCTTCCAAACAGCATGCAGCATCCATGCTTCAATTTCAGCAGCCACAGAACTTCCCCAACAGGACCGCTGCTTTAGTGCAGGCCCAGATGATGCAGCAGTCTCAACCTCAGCAAGCTTTTCAAAATAATCAAGAAAATATGCATCCATCTCAATCTGAGGCTCTAAGTCAGACTCATCTTCAGCATCAAAACTCTTTTGTTAATCAGCACCAGCAGCAGCCGCCACCGCATCAGCAACATCAACAGCAAAGTTTTTCTGATCAGCAGATTTCAAATAATGTCTCTACGATGTCTCAGTTTGTTTCAACACCTCAACCTCAGTCACCACCAACACAAGCTATTTCTTCGTTGTGCCATCAGCAAAGTTTTTCTGATTCGAATGGGAACAGTGTAGCTACTGCAATGGTTTCTCCCCTGCATAGTATTTTGGGTTCATTTCCCCAAGAAGAAACTTCCCACCTTCTAAACATTCCTAGGACAAGCTCTTGGATACCTGTTCAACCTTCTTCTGCTACTGCTACTTGGCCTTCCAAGCGTGTTGCCGTGGATCCTCTTCTTTCTTCTGGAGCTTCTCAATGTAATCTGCCTCACTTGGATCAGTTGGGGCAGCGCCAGAATACATTGTCTCAAAATGCAGTAACTTTGCCACCCTTCCCGGGAAGGGAGTGCTCGATTGACCATGAAGGGAGCACTGATCCACAAAACCATCTTTTATTTGGCGTTAATATAGAGCCCTCATCTCTTCTAGTGCAGAATGGGATGTCAAGCCTTAAGGGGGTTAGCAGCAATGTTGATTCCACAACCATAACTTTTCAATCTTCTAATTACCTGAATACTACAGGCACTGAATCAACATTTAATCCTGCAATGTCGCAAAGCATTGGTGAATCAGGATTCATGCAGGGCCCAGAAAATATGGGTCAAGGAAATTCTCCCAATAAAACCTTTGTAAAGGTTTACAAGGCAGGATCCTTCGGAAGATCATTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGTCGTGAGCTCGCTCGAATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGATGTTCTTCTCCTTGGTGATGGCCCTTGGCCGGAATTCGTCAACAGTGTATGGTATATCAAAATACTTTCCCCACAAGAAGTGCAACAAATGGGCAATAGTGGCCTCGAGCTTCTGAATTCGGTTCCAATTCAAAGACTTTCTAACGGCACATGTGAAGACTTTGTGAGCAGACAGGACCCAAGAAGTTTGAGCTCTGGGATCACAACTGTGGGGTCTCTAGACTACTAA 2691 0.4612 MRLSSAGFTPSPPEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDVHIPNYPSLPPQLICQLHNLTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTSSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDTVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDLGMNSPLFLDRGLQSLNFPGIGVTPWMQPRFDPSFLNLQPDMYQAMAAAALQDIRTIDPSKQHAASMLQFQQPQNFPNRTAALVQAQMMQQSQPQQAFQNNQENMHPSQSEALSQTHLQHQNSFVNQHQQQPPPHQQHQQQSFSDQQISNNVSTMSQFVSTPQPQSPPTQAISSLCHQQSFSDSNGNSVATAMVSPLHSILGSFPQEETSHLLNIPRTSSWIPVQPSSATATWPSKRVAVDPLLSSGASQCNLPHLDQLGQRQNTLSQNAVTLPPFPGRECSIDHEGSTDPQNHLLFGVNIEPSSLLVQNGMSSLKGVSSNVDSTTITFQSSNYLNTTGTESTFNPAMSQSIGESGFMQGPENMGQGNSPNKTFVKVYKAGSFGRSLDITKFSSYHELRRELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWYIKILSPQEVQQMGNSGLELLNSVPIQRLSNGTCEDFVSRQDPRSLSSGITTVGSLDY 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2112 896 FunFam Auxin response factor 291 363 - -
Mibi03g2112 896 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Mibi03g2112 896 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Mibi03g2112 896 Gene3D - 125 228 IPR015300 -
Mibi03g2112 896 FunFam Auxin response factor 125 229 - -
Mibi03g2112 896 FunFam Auxin response factor 758 852 - -
Mibi03g2112 896 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Mibi03g2112 896 ProSiteProfiles PB1 domain profile. 763 848 IPR000270 GO:0005515
Mibi03g2112 896 MobiDBLite consensus disorder prediction 476 578 - -
Mibi03g2112 896 SUPERFAMILY CAD & PB1 domains 755 838 - -
Mibi03g2112 896 SMART B3_2 127 229 IPR003340 GO:0003677
Mibi03g2112 896 Gene3D - 759 852 - -
Mibi03g2112 896 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 852 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi03g2112 896 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi03g2112 896 CDD B3_DNA 126 227 IPR003340 GO:0003677
Mibi03g2112 896 Gene3D - 291 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2112 Mibi-ChrMibi03 56819313 56824584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2112 1 479 B3 DNA Binding Superfamily AT1G30330 87.190 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi03g2112 B3 2.7e-22 CL0405