Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2107 ATGGCTCCTACAGGAGCCACCGCACTTCACTCCTCTCTCTGCAACTTCCCTTCTCCAAAACCATCACCTCCAAATCTCCAACATCAACCAAACACCCTTTTAGGCCCCAAACCCAAAAGTCCCCTCCAAAAACACCCACTTTATACTCCCACACACACAAGACTCTCCCTTGAATTCAAAGAGAAAATCCTCTGCCTTGAAATCATGGGTGTTGATTCAGGAAAAGCACTCTCAGTAAACCCAGATCTCAGAACTGCAACCATGGAATCCATCCATTCCATCATCTCCTTCCTTCATTCCAAAGGCATTCAACAGAATGACTTGCCTAGAATTCTGGGTATGTGCCCAAGGATTCTTACCTGCAGCATCAAATCTGAGCTTAACCCTGTTTTTGATTTCCTCTCTAAGGAACTTAGAGTCCCAGATCGTAGCTTTAGGAGGGTAATTAACAAATGCCCAAGATTGCTTACTTCTAGTGTCAAAGATCAGCTCAAGCCAGCTTTGTTTTACCTTCAGAGGCTAGGTTTTAAGGATTTATCAGCCCTGGCTTATCAAGATTCTGTCTTGTTGGTTTCTAATGTGGAAAGGACTTTGATTCCTAAACTGGAGTTTCTGGAGAATCTTGGGTTTTCAAAGGAGGAGACTAAAGATATGGTTTTGAGGTGCTCTGCATTGTTGACTTTTAGTATTGACAATAATTTCCAGCCAAAGTTTGAGTATTTTGATAAGGTGATGGGGAGAAAGTTGGAGGAGTTGAAGGAGTTTCCTCAGTATTTTGCTTTTAGCTTGGAGAACAGGATAAAGCCAAGGCATATGGAGGCTTTGCAAAGTGGGATCAATATGCCTTTGTCTTTGATGCTTAAGAGCACTGATGATGAGTTTAGGGAGCTCATAAAAAAGCAGAAAACTGGTGGATAA 918 0.4227 MAPTGATALHSSLCNFPSPKPSPPNLQHQPNTLLGPKPKSPLQKHPLYTPTHTRLSLEFKEKILCLEIMGVDSGKALSVNPDLRTATMESIHSIISFLHSKGIQQNDLPRILGMCPRILTCSIKSELNPVFDFLSKELRVPDRSFRRVINKCPRLLTSSVKDQLKPALFYLQRLGFKDLSALAYQDSVLLVSNVERTLIPKLEFLENLGFSKEETKDMVLRCSALLTFSIDNNFQPKFEYFDKVMGRKLEELKEFPQYFAFSLENRIKPRHMEALQSGINMPLSLMLKSTDDEFRELIKKQKTGG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2107 305 Gene3D Transcription termination factor 3, mitochondrial 143 303 IPR038538 -
Mibi03g2107 305 FunFam Transcription termination factor MTEF1, chloroplastic 134 302 - -
Mibi03g2107 305 Pfam mTERF 66 178 IPR003690 GO:0003690|GO:0006355
Mibi03g2107 305 Pfam mTERF 189 294 IPR003690 GO:0003690|GO:0006355
Mibi03g2107 305 MobiDBLite consensus disorder prediction 1 44 - -
Mibi03g2107 305 PANTHER CGI-12 PROTEIN-RELATED 57 299 IPR003690 GO:0003690|GO:0006355
Mibi03g2107 305 SMART mt_12 109 141 IPR003690 GO:0003690|GO:0006355
Mibi03g2107 305 SMART mt_12 249 282 IPR003690 GO:0003690|GO:0006355
Mibi03g2107 305 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Mibi03g2107 305 SMART mt_12 74 104 IPR003690 GO:0003690|GO:0006355
Mibi03g2107 305 SMART mt_12 216 248 IPR003690 GO:0003690|GO:0006355
Mibi03g2107 305 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2107 Mibi-ChrMibi03 56748946 56749863 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mibi03g2107 mTERF 1e-27 No_clan