Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2105 ATGTCGTCGTCTTCGACTTCTCGTACTGGAACTCCTAGCGGAAAAACTCGTGTGGGAAAGTTCGAGCTGGGTAGGACTTTAGGTGAGGGCAATTTCGCTAAGGTAAAGCTTGCCCGTAATGTTGAGACTGGAGAGAATGTGGCTATCAAGATTATTGACAAGGACAAGATTCTCAAACACAAAATGGTTCGCCAGATAAAGCGAGAGATATCAACAATGAAATTGATTAGGCACCCAAATGTCATACGCATGTATGAGGTGATGGCTAGCAAGACAAAGATATATCTTGTACTAGAGTTTGTGACTGGCGGGGAATTGTTTGATAAAATTGCAAGCAAGGGCAGGTTAAAAGAAGATGAAGCAAGAAAATATTTCCAGCAGCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTGCCATAGGGACCTTAAGCCTGAAAATTTGTTGCTGGATGCTAATGGATTTCTTAAAGTTTCAGATTTTGGATTGAGTGCACTGCCTCAACAGCTTCGAGAAGACGGGCTGCTTCACACAACATGTGGTACCCCAAATTATGTTGCCCCAGAGGTGATCCACAACAAAGGCTATGATGGCACAAAGGCAGATCTTTGGTCATGTGGTGTTATTCTTTTTGTTTTAATGGCTGGCTACTTGCCCTTTGAAGATACAAATATTATGTCTTTATATAAAAAGATCTTCAAGGCTGATTTCACATGCCCTCCATGGTTCTCATCAAATGCAAAGAAATTAATCCAGAGAATTCTTGATCCCAATCCGGCTACACGAATAACATTTGCTGAGGTTATTGAGAATGATTGGTTTAAGAAGGGATATGTGCCTCCTAGATTCGAGCAAGCTGATGTTAGTCTTGATGATGTACATGCTATTTTCAGCGAATCAATGGATTCTCAGAATTTGGTTGTTGAGAGGCGAGAAGAGGCAGCAGTGGCACCTATGGCTATGAATGCTTTTGAACTTATCTCTACATCTCAAGGCCTTAACCTTAGTTGTCTTTTTGAGAAACAAATGGGACTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTCCAGCGAATGAGATAATTTCAAAAATTGAGCAAACTGCAACACCTATGGGTTTTGATGTTAGGAAGAATAACAACAAGCTAAAGCTTCACGGGGAAAAGAGCGGACGTAAAGGACATCTATCTGTTTCGACTGAGATATTTGAGGTGGCCCCATCACTTTGCATGGTTGAGCTCCGCAAGTCTGGAGGAGATACTCTGGAATTTCATAAGTTCTACCAGAACCTCTCTACGGGGCTGAAAGATGTTGTTTGGAAAGCAGAACCGATAGCTGAAGAAACAAATGGTGGCAGTACTGCTTCAAGGTAG 1380 0.4159 MSSSSTSRTGTPSGKTRVGKFELGRTLGEGNFAKVKLARNVETGENVAIKIIDKDKILKHKMVRQIKREISTMKLIRHPNVIRMYEVMASKTKIYLVLEFVTGGELFDKIASKGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGFLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVIHNKGYDGTKADLWSCGVILFVLMAGYLPFEDTNIMSLYKKIFKADFTCPPWFSSNAKKLIQRILDPNPATRITFAEVIENDWFKKGYVPPRFEQADVSLDDVHAIFSESMDSQNLVVERREEAAVAPMAMNAFELISTSQGLNLSCLFEKQMGLVKRETRFTSKCPANEIISKIEQTATPMGFDVRKNNNKLKLHGEKSGRKGHLSVSTEIFEVAPSLCMVELRKSGGDTLEFHKFYQNLSTGLKDVVWKAEPIAEETNGGSTASR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2105 459 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Mibi03g2105 459 SUPERFAMILY Protein kinase-like (PK-like) 18 292 IPR011009 -
Mibi03g2105 459 SMART serkin_6 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2105 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Mibi03g2105 459 CDD STKc_SnRK3 20 275 - -
Mibi03g2105 459 Gene3D Transferase(Phosphotransferase) domain 1 101 281 - -
Mibi03g2105 459 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Mibi03g2105 459 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Mibi03g2105 459 FunFam Non-specific serine/threonine protein kinase 14 317 - -
Mibi03g2105 459 Pfam NAF domain 320 380 IPR004041 GO:0007165
Mibi03g2105 459 FunFam Non-specific serine/threonine protein kinase 317 443 - -
Mibi03g2105 459 Pfam Protein kinase domain 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2105 459 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2105 459 Gene3D Kinase associated domain 1, KA1 318 443 - -
Mibi03g2105 459 Gene3D Phosphorylase Kinase; domain 1 10 100 - -
Mibi03g2105 459 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 432 - -
Mibi03g2105 459 CDD CIPK_C 324 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2105 Mibi-ChrMibi03 56730888 56737420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2105 4 450 CBL-interacting serine-threonine protein kinases AT1G01140 67.770 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi03g2105 Pkinase 2.6e-76 CL0016