Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2074 ATGTATCAATCAAAGACTGTTCCTAATTCAACTCTAGTTGGCGGCAATATATTAGTTCATGGTCAGCATTTAGATTGTGGTGGTAGTGCAATGGATCCTCTCAATGGAGGAAACAATCCTGCCAACAACTCTAATCTCAGCTCAAAGCAACGTTTACGCTGGACGCATGAGCTGCATGAACGTTTTGTTGATGCTGTGGCACAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGAGTTATGGGTGTGCAAGGCTTAACAATATATCATGTCAAAAGCCATTTACAGAAATATCGGCTTGCAAAATACCTCCCTGATTCCTCATCTGATGGGAAAAAAGCCGAAAAGAAAGAAACAGGGGACATGCTTTCCAATCTAGATGGCTCTTCTGGTGGGATGCAAATTACTGAAGCACTGAAGCTACAGATGGAGGTGCAGAAGCGACTGCATGAGCAATTGGAGGTTCAGAGACAACTTCAACTACGAATAGAAGCCCAGGGTAAATACCTGAAGAAGATTATTGAAGAGCAGCAGCGGCTCAGTGGGGTTCTGTCAGACTCACCTTGCTCAGGTGTTGATGCTCCGACCTCGGCTGATGGATGTCAAGAACATGAGAATAAAACTGACCCGGCTACTCCAGCTCCGACCTCTGAGTGCCCCCTCCTAGATAAAGCAGCAAAAGAACGCGCCCCTGCAAAGAGTCTGTCTATCGACGAATCATTCTCATCTCACCATGAACCATTGACCCCGGATTCTGGTTGCAATGCTGGCTCACCCATTGATAGCCCTGGAGGTGAGAGACCGATGAAGAAGCACCGGGTGAGCATGGAGGGAGCATATTCTAAATCAGAAATGATGCTCCCCCATCAGATACTAGAATCAAGCATGCCATCATACCAGCAACCAACCAATGTTTTCCTTACTGGAGAGCAGTTTGATCCTTCATTGGGTATATCTACTAGGAGTGAGGAGGCATTACAGAAGGTTGGTGGCAACAATCTGTGA 1014 0.4675 MYQSKTVPNSTLVGGNILVHGQHLDCGGSAMDPLNGGNNPANNSNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKAEKKETGDMLSNLDGSSGGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSDSPCSGVDAPTSADGCQEHENKTDPATPAPTSECPLLDKAAKERAPAKSLSIDESFSSHHEPLTPDSGCNAGSPIDSPGGERPMKKHRVSMEGAYSKSEMMLPHQILESSMPSYQQPTNVFLTGEQFDPSLGISTRSEEALQKVGGNNL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2074 337 Coils Coil 139 159 - -
Mibi03g2074 337 MobiDBLite consensus disorder prediction 187 259 - -
Mibi03g2074 337 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Mibi03g2074 337 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Mibi03g2074 337 MobiDBLite consensus disorder prediction 108 132 - -
Mibi03g2074 337 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Mibi03g2074 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Mibi03g2074 337 MobiDBLite consensus disorder prediction 316 337 - -
Mibi03g2074 337 MobiDBLite consensus disorder prediction 109 125 - -
Mibi03g2074 337 Gene3D - 48 107 - -
Mibi03g2074 337 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Mibi03g2074 337 FunFam Myb family transcription factor 48 106 - -
Mibi03g2074 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 44 328 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2074 Mibi-ChrMibi03 56211277 56214358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2074 84 337 G2-like Transcription Factor Family AT2G01060 65.098 1.65e-98 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi03g2074 Myb_DNA-binding 2.2e-08 CL0123