Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2060 ATGTGGTCACAAGTTCTTCCTGATTTTTGTCCTTTTGATAGGGATCTCTCTTACAACAAGGAATTAACTGGTTCACTTCCACCAGAAATTGGAAACTTACAGAAACTGTCCAACTTTTTCACTGGTCCTATTCCAGATAATATAGGATCCCTGCAGCAGCTTGTTTTCTTTCATCTCGGAAAGAACAAGCTTTCAGGAAAAATCCCCCCTCAGCTTTTTACCTCAGAAATGACTCTGATACACTTGATTTTGGATAACAATCAACTTACGGGCAACATACCTCTAACACTTGGACTAGCTCAAAGTCTGGAGGTGGTGCGATTTGACAATAATTCCTTATATGGACACTTGCCTCAAAACATCAACAATCTTACGAATCTTCAAGAGATGTACTTGCCTAACAATAAGCTGTCTGGTCCTATGCCAAAGCTGGATGAAATGAATTTACTCAGATACCTATTGGTGAGTAATCCTATTTGCCATGAAGAGGGAGAAACACAAAGTTACTGTTCTGATGTGCCAGACAATATATCATATACAGCACCAGCACCACCAAGTTCTTGCCCTCCTGTTGCATGCAGATCAGATCAGATCCTTAGTCCAAACTGCAAATGTGCATACCCATTCATAGGAATTTTAAGTTTCAGAACACCTTCCTTCCCAGACTGGCAAACATATACTCACTTTGAGAAAAATCTAATGGATGATTTTAAAGCTAATGATCTACCTGTGGATTCAGTTTCTCTGAAAAATCTGACCTACAATCAATTTCAAGATGTTGAGTTGTCCTTACAATTGTTCCCTTCAAGGGAAGATCATTTCGACAGTGCTGAGATTTCTAGTATAACTTCTCTTCTAAGCAACTTGACCAATTATCCATTCTATTTCTTTCCAAACCCATATGGACTCTATGGGCACTGGGTTTCAAATAATGATAACAAAATCATTACCCCTCAGTTGCAAGGAGTGAGGCAATTCTCTTTTGCAGAGGTCAAGAGATGCACCAGAAATTTTTCTCAGAACAATGATATTGGATCTGGGGGTTATGGAAAGGGCTATTTAGATCCAGAGTACTACACAAGTCAGCGTTTGACCGAAAAGAGCGATGTTTACAGCTTTGGAGTTCTAATGCTGGAGATGATAACTGCTAGAAAACCCATAGAGAAAGGGAAATACATTGTGAAAGTGGTTAGGAATTTAATTGATAGAGAAAAGGAGTTGTATGGCCTTGAAGAAATTATTGATCCAATGATTCGTTTGGAATCATCAACACTGAAGGGTTTAGAGAACTTTGTGGATCTCTCGATGAAGTGTCTTCAAGAGACAGGTGCTGAGAGGCCTTCAATGAATGATGTGGTAAAAGAAATTGAAAGCATTTTGCTCATTGCTGGTTTGAACAACACTTCTGGAACAATAGCATCTACTTCATCTAGTTATGATGAGATAACAAGAGGGACTTCTCAGAATCTTTTCACTGATCATTCCTTTGATTCAGGTGTAGTACCATTGCAACCAAAAATTGAGCCTAAGTAA 1533 0.3881 MWSQVLPDFCPFDRDLSYNKELTGSLPPEIGNLQKLSNFFTGPIPDNIGSLQQLVFFHLGKNKLSGKIPPQLFTSEMTLIHLILDNNQLTGNIPLTLGLAQSLEVVRFDNNSLYGHLPQNINNLTNLQEMYLPNNKLSGPMPKLDEMNLLRYLLVSNPICHEEGETQSYCSDVPDNISYTAPAPPSSCPPVACRSDQILSPNCKCAYPFIGILSFRTPSFPDWQTYTHFEKNLMDDFKANDLPVDSVSLKNLTYNQFQDVELSLQLFPSREDHFDSAEISSITSLLSNLTNYPFYFFPNPYGLYGHWVSNNDNKIITPQLQGVRQFSFAEVKRCTRNFSQNNDIGSGGYGKGYLDPEYYTSQRLTEKSDVYSFGVLMLEMITARKPIEKGKYIVKVVRNLIDREKELYGLEEIIDPMIRLESSTLKGLENFVDLSMKCLQETGAERPSMNDVVKEIESILLIAGLNNTSGTIASTSSSYDEITRGTSQNLFTDHSFDSGVVPLQPKIEPK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2060 510 FunFam Leucine-rich repeat protein kinase family protein 45 143 - -
Mibi03g2060 510 SUPERFAMILY Protein kinase-like (PK-like) 352 461 IPR011009 -
Mibi03g2060 510 Gene3D Ribonuclease Inhibitor 2 170 IPR032675 -
Mibi03g2060 510 PANTHER RECEPTOR-LIKE PROTEIN 55 352 459 - -
Mibi03g2060 510 Pfam Protein kinase domain 350 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2060 510 Gene3D Transferase(Phosphotransferase) domain 1 323 468 - -
Mibi03g2060 510 SUPERFAMILY L domain-like 15 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2060 Mibi-ChrMibi03 56044974 56051270 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2060 352 510 Receptor kinase-like Gene Family AT5G49760 48.125 3.22e-40 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mibi03g2060 Pkinase 5.1e-08 CL0016