Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2058 ATGAGAGTGGGGAGCAAGTGGAAGTGTTGCTTCATGTGGAAAATGGGTGAGAGAAGGGTTCGTGAATTGCTCTCTTCATCTCTTCTTCTCAACTTCTTGTTGCTTTCATTTGCAGAATCATCATCATCATCCATGGAAGATGATGTGAATGGCCTAAATTCTCTGAAGAACCTAATGCAAAATGTACCCCAAAGTTGGGAAATTTCAGATCCTTGCAATGGTTGGGAAGGAATTACCTGCACCAATTCTCGTGTTACTTCCATAAAATTACCAGGCATGGATTTAAATGGCCAGCTTTCTGCTGATATTGGATTGCTCTCTGAATTACAGGATTTGGATCTCTCTTACAATAAATACCTAGGAGGATCACTTCCAAAAGAAATTGGAAATTTGAAGAAGCTAACGGAATTATTACTTGTTGGTTGTGGTTTCACTGGTTCTATTCCTGATGAACTTGGATCATTATCGGAGCTTGTCTTTCTATCTTTAAACTCTAACAGCTTTGATGGAGGAATTCCAGCTTCCATTGGCAATCTATCAAAACTGCAATGGCTAGACTTAACTGATAATCAACTTGATGGACCTATCCCAGTGTCAAATGGAGCTACTCCTGGTTTAGATATGCTACACAAAGCGCTGCATTTTCATCTTGGGAACAACAAGCTCTCAGGAGTTATTCCTCCGAAACTTTTCAGCTCAAATATGGCTCTGATACATTTGATCTTGAATAGCAATAAACTTATTGGAAATATTCCCGATACACTTGGAAATGCTCAAAATCTTTTGGTGGTGCGCTTGGAAATTAATTCTTTGACTGGCTTTGTACCTCAGAACCTTACAAACCTCCCCAATATTACAGACCTGATTTTGTCCAATAATAATCTGCAGGGTACCATTCCAAACCTCAGTGGAATAAATGCTCTCCAATACTTGGATATGAGCAACAATAGCTTTCAGCCATCTGAATTTCCATTATGGCTTCAAAATTTAACACATTTAAAGGCACTAATAATGGAAAACTCAAATCTTGTTGGGAAGATTCCTGCTGCCTTTTTTAGTCTAGTCAATTTACGGAATGTGGTTCTGAAAGACAATAAACTCAGTGGGAATCTGGACATTGGCACCAACTACAGCAAAAATCTGCAACGGATTGATTTGCAGAATAATAAAATTGAGGATTTTAACAAACAAGATGAAGCCTCTGGGATTACAATAATACTTGTGGGCAACGTTGCTTGTTATGAAAAAGGTTCTGAAAAAAGCTCTCTCTGTACCATTCATGATGAATCACCTAAAGAATTGCCCAAGAACTGTGTGAATATTGGATGCAGTGTCCCAAATCAGATTCTTAGTCCCAACTGCAAATGTGCATTTCCATATGAAGGAACTTTTTCTTACAGAGCTCCTTCTTATATGAACAAAACTGACCTTGAGAAAGATCTTATGAAACAATTCCAATCCCATCATCTACCTGTGGACTCTGTGTCTGTGACCAATCCACCTTGCTCTCGCTCTCTATTCAAGTGTTTTGAACTCATTGTACAAATCTTCCCTTCAGATCAAGACCACTTCAATCGAACAGTGATAACTGCAATAAGCTTGCTGCTAAGTGACCTCAATAGACATTCACCATACACTTTCCTTCTTGGTCTTGATAACTATGGACTTGAAAGTGGGAGTAAATCATCAAACACCAGAATTATTATTGGAGCTGCAGTTGGTGGTTTTGTGTTGCTATTGCTATTTCTCCTAGCAGGTGTTTATGCTTTTTGCCAAACGAGAAGAGCAGAAAAAGCAATTGAAGAAAACAATCCATTTGGCCGCTGGGATCTAAGTGACAACATTAGCCCCAAACCTCAGTTACATGGAGCTAGGAGATTCTCTTTCAAGGAACTTAAAGAATACACGAGCAATTTTTCACAAACCAATGAGATTGGATCTGGGGGTTATGGGAAGGTTTTTCGGGGAACTCTTCCCAATGGACAACTGGTTGCAATAAAGCGAGCTCAGAAACAATCAAATCTAGGAGGACTTCAGTTTAAAGCTGAGATTGAACTCCTTTCAAGAGTCCACCATAAGAATCTGGTTAGCCTTGTGGGATTCTGCTTCGAGCGAGGAGAACAGATGCTAGTTTATGAATTTGTTCCTAATGGAACCTTGAAAGATAGCATCTCAGGGAAGTCCAGCATAAGACTGGACTGGACTAGAAGGTTAAAAGTAGCCCTTGGTACTGCCAGGGGTTTGGCTTATCTGCATGAACATGCCAATCCTCCTGTTATACATAGAGACATTAAATCGACCAACATTTTGCTGGATGAGCACTTGAATGCAAAAGTTGCCGATTTTGGTCTTTCCAAGCCTATGGACAATTGTGATAAAGATCACGTTTCCACACAAGTTAAAGGAACACTGGGCTACTTAGATCCGGATTATTACACAACTCAACAATTGACTGAGAAAAGCGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAAACCTATACAAACAGGGAAACATCTTGTTAAAGTATTTAGGAGTACAATTGATAAGTCAAAATACTTGCTTGGCCTTCGAGAAATTCTTGATCCAGCTCTTCTTGCCTTTGGCTCACCATTGATGGAACTGGGGAACTTTGTTGATCTTGCAATGAAGTGTGTTGAGGATTCAGGGGCAGACAGACCAACAATGAGCGATGTGGTGAAAGAAATAGAAAGCATGTTAAAATCTGCTGGTTTGAACTCTATAGCTGAATCATCTGCATCTAATTCAGCTAGCTTTGAGGACGTAAGTAATGCGACTGCACATCATGCTCTCAATAGCAATGAGTCTCTGGATTCAAGTTCATTCTGCAATGTCAGAAAGATTTAG 2886 0.3964 MRVGSKWKCCFMWKMGERRVRELLSSSLLLNFLLLSFAESSSSSMEDDVNGLNSLKNLMQNVPQSWEISDPCNGWEGITCTNSRVTSIKLPGMDLNGQLSADIGLLSELQDLDLSYNKYLGGSLPKEIGNLKKLTELLLVGCGFTGSIPDELGSLSELVFLSLNSNSFDGGIPASIGNLSKLQWLDLTDNQLDGPIPVSNGATPGLDMLHKALHFHLGNNKLSGVIPPKLFSSNMALIHLILNSNKLIGNIPDTLGNAQNLLVVRLEINSLTGFVPQNLTNLPNITDLILSNNNLQGTIPNLSGINALQYLDMSNNSFQPSEFPLWLQNLTHLKALIMENSNLVGKIPAAFFSLVNLRNVVLKDNKLSGNLDIGTNYSKNLQRIDLQNNKIEDFNKQDEASGITIILVGNVACYEKGSEKSSLCTIHDESPKELPKNCVNIGCSVPNQILSPNCKCAFPYEGTFSYRAPSYMNKTDLEKDLMKQFQSHHLPVDSVSVTNPPCSRSLFKCFELIVQIFPSDQDHFNRTVITAISLLLSDLNRHSPYTFLLGLDNYGLESGSKSSNTRIIIGAAVGGFVLLLLFLLAGVYAFCQTRRAEKAIEENNPFGRWDLSDNISPKPQLHGARRFSFKELKEYTSNFSQTNEIGSGGYGKVFRGTLPNGQLVAIKRAQKQSNLGGLQFKAEIELLSRVHHKNLVSLVGFCFERGEQMLVYEFVPNGTLKDSISGKSSIRLDWTRRLKVALGTARGLAYLHEHANPPVIHRDIKSTNILLDEHLNAKVADFGLSKPMDNCDKDHVSTQVKGTLGYLDPDYYTTQQLTEKSDVYSFGVLMLELITARKPIQTGKHLVKVFRSTIDKSKYLLGLREILDPALLAFGSPLMELGNFVDLAMKCVEDSGADRPTMSDVVKEIESMLKSAGLNSIAESSASNSASFEDVSNATAHHALNSNESLDSSSFCNVRKI 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2058 961 Gene3D Transferase(Phosphotransferase) domain 1 715 935 - -
Mibi03g2058 961 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 715 926 - -
Mibi03g2058 961 ProSitePatterns Protein kinases ATP-binding region signature. 645 667 IPR017441 GO:0005524
Mibi03g2058 961 SUPERFAMILY Protein kinase-like (PK-like) 614 908 IPR011009 -
Mibi03g2058 961 Pfam Leucine rich repeat N-terminal domain 46 80 IPR013210 -
Mibi03g2058 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 759 771 IPR008271 GO:0004672|GO:0006468
Mibi03g2058 961 CDD STKc_IRAK 645 912 - -
Mibi03g2058 961 Gene3D Ribonuclease Inhibitor 204 407 IPR032675 -
Mibi03g2058 961 Gene3D Phosphorylase Kinase; domain 1 610 714 - -
Mibi03g2058 961 FunFam Leucine-rich repeat family protein 47 201 - -
Mibi03g2058 961 Pfam Protein kinase domain 640 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2058 961 Gene3D Ribonuclease Inhibitor 46 202 IPR032675 -
Mibi03g2058 961 SUPERFAMILY L domain-like 57 396 - -
Mibi03g2058 961 ProSiteProfiles Protein kinase domain profile. 639 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2058 961 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 617 714 - -
Mibi03g2058 961 PANTHER RECEPTOR-LIKE PROTEIN 55 57 913 - -
Mibi03g2058 961 FunFam Leucine-rich repeat protein kinase family protein 202 301 - -
Mibi03g2058 961 SMART serkin_6 639 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2058 Mibi-ChrMibi03 56015172 56025498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2058 32 914 Receptor kinase-like Gene Family AT1G79620 48.394 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mibi03g2058 Pkinase 8.4e-46 CL0016