Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2057 ATGGGTGGAAGAATACTGGTATTCCTCCTGCTTGTCTGGAATTCTTTGCTGGTTGCAGTAGCACAAACTGTCACTGAGGATTTGACTATTCTGAAGTCTCTTATGGATACCTGGCAGAACACACCTCCCAATTGGGTGGGATCTGATCCTTGTAATGGTTGGGATGGAATTAAGTGCACCAATTCACACGTTACTTCCATATCATTATCAAGCACAGGTTTGGCTGGCCAACTTTCTGGAGATATTGGATCACTATCTGAATTAGTGACCTTGGATTTGTCATACAACAAGGGCTTGATAGGATCACTTCCTCAAACCATTGGAAATTTAAAGAAGCTGTCAACCTTAATTCTTGTTGGTTGCAGTTTCAATGGTCCTATCCCAGAAGAAATAGGAAATCTGCAGGAGCTCTCCTATCTATCTTTAAATTCCAACAAGTTTGTTGGACAAATTCCAGCTTCTATTGGTAATCTGTCTAAACTTTATTGGTTAGATTTAGCTGATAATCAGCTTGAAGGACCCCTCCCAGTATCTAGTGGTGGTAAACCTGGTCTTGATATGCTCCATCATGCAAAGCATTTTCATTTTGGCAACAATAAGCTTTCAGGCCCTATTCCTCCTAAACTTTTTAGCTCGGAAATGACTTTGATTCATGTGCTTTTTGAAAGCAATCAACTCAGTGGAAGCATCCCACCTACACTTGGGCTTGTTCAGAGTCTGGAGGTGATGCGTCTTGACAGTAATTCTCTAAGTGGACCTTTGCCGTCAAATATCACCAGCCTTGTGAAAGTTCAAGAGATGTACTTGTCCAACAATAAGTTTTCTGGATCCCTGCCAAATCTTGCTGGAATGAGTGTCCTCAGCTACATGGATATCAGCAATAATAGCTTTAGTTCATGGGATTTTCCTTCATGGTTCTCATCCATGGAGTCCCTAACTACGTTAAAAATGGAAAACACACAACTTCAAGGACAGATATTATCTTCTTTCTTTAGCCTTCCCAATTTACAGACTGTGGTTTTAAAACTCAATGAACTAAATGGGACATTGGACATTGGCACCACTTACAGCAGCCAGCTACGACTCATTGACTTGCAGAGTAATAAAATTGATGAGGTCGTTTCAAATGGAGTCTCCAAAGTCAAGACAATACTCAAAGGTAACCCAATTTGCGAAGAAAATGGAATGGCATCAAAGAGTTACTGCTCGGATTCCCAACCCAATGATAACCTATATAAAACACCATTTAATAACTGTGAGCCTGGTGCCTGTAGTATAGAACAGCTTCCTAGCCCCAAGTGCCAATGCTCTTATCCATATACAGGAATTTTATTTTTCAGAGCACCTTCCTTCTCAGACTTGGAAAACAACACTCACTATATAACCCTTCAGGAGTCTCTTATGCATTCTTTTCTAGTTCATAATCTTCCTGTGGATTCAGTTTCTCTGAGCCATCCAATCAAGGATTCAAGTCAGTATCTTGAATTGAGCTTACAAGTCTTCCCATCAAATCAAGATCGTTTCAATCGAACTGGGACTTCTAGCATTGGCTTTCTTCTAAGTAATCAGACATTTAAACCTCCTAAAGAGTTTGGACCATTTTACTTCAATGCAGACAGCTATGGGCACTTTGCTGTGAAGCCTAGTAAATCATCAAACCTTGGCATCATAATAGGAGCAGCAGTGGGTGGCTCACTCTTGCTAGTGTTGTTACTCATAGCTGGTGTTTATGCTTGCTTCCAAAAGAAGAGGGCAGAAAGAGCAATTGACCAGAACAATCCTTTCAGGCGCTGGGATAGTGAGAGCACTACTGGTGTCCCTCAGTTGAAAGGTGCAAGACAGTTCTCATTTGAAGAGATAAAAAAGTGCACTACAAATTTTTCTCAAGCTAATGAGATCGGAACTGGTGGCTACGGGAAGGTTTACAAGGGAACTCTTCCAAATGGACAGCTGATAGCCATAAAACGAGCTCTAAAAGAATCTATGCAAGGAGCTTTTCAATTTAAAGCTGAGATTGAACTTCTATCTAGAGTCCACCATAAAAATTTGGTTAGTCTTGTAGGATTCTGCTTTGAGAAAGGAGAACAAATGCTTGTCTATGAATATGTATCAAATGGGAGTCTGAAGGATACTCTCTCAGGGAAATCAGGATTTAAATTGGATTGGATCAGAAGGCTAAAAATAGCCCTTGGTACTGCTAGGGGTTTGGCTTATCTTCATGAACACGCCAACCCTCCTATTATACACAGGGACATCAAATCCAACAATATTTTACTGGATGAGCGCTTGAATGCTAAGGTTGCTGATTTTGGTCTCTCCAAGTCTATGGTTGATACGGAAAAAGACCATATTACCACTCAAGTTAAAGGAACAATGGGCTATTTGGATCCAGAGTATTATATGTCTCAACAATTAACTGAGAAGAGTGATGTTTACAGTTTTGGAGTGCTATTGATGGAGCTGATAACTGCGAGAAAACCTATAGAAAGAGGGAAATATATAGTAAAAGAGGTCAAGAGTGCAATTGATAAGAGCAAAAATTTATGTGGTCTTTATGAATTCATTGACCCCACCATGGATTTAGGGTCGACACTGATTGGTTTTGAGAAGTATGTAAGTCTTTCAATTATGTGTGTGGAGGAGTCAGGTTCTGACAGGCCTGCAATGAGTGATGTGGTGAAAGAGATTGAAAACTTGTTGCTATTTGCTGGTGCTAATCCCAATGCAGAATCAGCATCCACATCAGCTAGTTATGAGGATATTAGTAAAGGAAGTTCTCATCATCCTTACAGCAGTGAGTCCTTTGATGCAGGTGCAGTGCTTCCAAATCCAAAGATTGAACCTATGTAA 2850 0.4032 MGGRILVFLLLVWNSLLVAVAQTVTEDLTILKSLMDTWQNTPPNWVGSDPCNGWDGIKCTNSHVTSISLSSTGLAGQLSGDIGSLSELVTLDLSYNKGLIGSLPQTIGNLKKLSTLILVGCSFNGPIPEEIGNLQELSYLSLNSNKFVGQIPASIGNLSKLYWLDLADNQLEGPLPVSSGGKPGLDMLHHAKHFHFGNNKLSGPIPPKLFSSEMTLIHVLFESNQLSGSIPPTLGLVQSLEVMRLDSNSLSGPLPSNITSLVKVQEMYLSNNKFSGSLPNLAGMSVLSYMDISNNSFSSWDFPSWFSSMESLTTLKMENTQLQGQILSSFFSLPNLQTVVLKLNELNGTLDIGTTYSSQLRLIDLQSNKIDEVVSNGVSKVKTILKGNPICEENGMASKSYCSDSQPNDNLYKTPFNNCEPGACSIEQLPSPKCQCSYPYTGILFFRAPSFSDLENNTHYITLQESLMHSFLVHNLPVDSVSLSHPIKDSSQYLELSLQVFPSNQDRFNRTGTSSIGFLLSNQTFKPPKEFGPFYFNADSYGHFAVKPSKSSNLGIIIGAAVGGSLLLVLLLIAGVYACFQKKRAERAIDQNNPFRRWDSESTTGVPQLKGARQFSFEEIKKCTTNFSQANEIGTGGYGKVYKGTLPNGQLIAIKRALKESMQGAFQFKAEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYVSNGSLKDTLSGKSGFKLDWIRRLKIALGTARGLAYLHEHANPPIIHRDIKSNNILLDERLNAKVADFGLSKSMVDTEKDHITTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVLLMELITARKPIERGKYIVKEVKSAIDKSKNLCGLYEFIDPTMDLGSTLIGFEKYVSLSIMCVEESGSDRPAMSDVVKEIENLLLFAGANPNAESASTSASYEDISKGSSHHPYSSESFDAGAVLPNPKIEPM 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2057 949 FunFam Leucine-rich repeat family protein 26 180 - -
Mibi03g2057 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Mibi03g2057 949 Gene3D Ribonuclease Inhibitor 181 281 IPR032675 -
Mibi03g2057 949 SUPERFAMILY L domain-like 27 299 - -
Mibi03g2057 949 MobiDBLite consensus disorder prediction 909 932 - -
Mibi03g2057 949 SMART serkin_6 627 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2057 949 FunFam Leucine-rich repeat protein kinase family protein 181 280 - -
Mibi03g2057 949 MobiDBLite consensus disorder prediction 909 949 - -
Mibi03g2057 949 Gene3D Ribonuclease Inhibitor 21 180 IPR032675 -
Mibi03g2057 949 Pfam Protein kinase domain 628 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2057 949 Gene3D Ribonuclease Inhibitor 282 410 IPR032675 -
Mibi03g2057 949 ProSitePatterns Protein kinases ATP-binding region signature. 633 659 IPR017441 GO:0005524
Mibi03g2057 949 Gene3D Transferase(Phosphotransferase) domain 1 703 913 - -
Mibi03g2057 949 Gene3D Phosphorylase Kinase; domain 1 599 702 - -
Mibi03g2057 949 CDD STKc_IRAK 633 899 - -
Mibi03g2057 949 PANTHER RECEPTOR-LIKE PROTEIN 55 32 898 - -
Mibi03g2057 949 SUPERFAMILY L domain-like 282 375 - -
Mibi03g2057 949 SUPERFAMILY Protein kinase-like (PK-like) 613 910 IPR011009 -
Mibi03g2057 949 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 703 912 - -
Mibi03g2057 949 ProSiteProfiles Protein kinase domain profile. 627 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g2057 949 FunFam Leucine-rich repeat protein kinase family protein 592 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2057 Mibi-ChrMibi03 56002750 56012501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2057 7 948 Receptor kinase-like Gene Family AT5G49760 57.624 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mibi03g2057 Pkinase 4.3e-48 CL0016