Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2056 ATGAGTCTGAGTCACAGCCATAGCCATGAGGACACCACAACCACTGAGGCCGCCACGAAGGTAGACGATGGTCATGAGCTAGACATGGTGATGCCTGGCTTCAGATTTCACCCAACAGAAGAAGAGCTTGTTGAATTCTACCTTCGCCGTAAGGTAGAGGGAAAACGTTTCAATGTTGAGCTCATCACTTTCCTTGATCTTTATCGCTATGACCCCTGGGAACTCCCTGCCATGGCAGCGATTGGTGAGAAGGAGTGGTACTTCTATGTGCCAAGGGACCGGAAGTACCGGAACGGGGATAGGCCGAACCGGGTAACAACGTCGGGGTATTGGAAAGCCACCGGAGCTGATAGGATGATAAGAAGTGAGAATTTCAGGTCAATTGGGCTGAAGAAAACCCTAGTTTTCTACTCTGGCAAAGCTCCTAAAGGTATAAGAACTAGTTGGATCATGAACGAATATCGCTTGCCTCATCACGACACTGAACGATACCAAAAGGCTGAGATATCTTTGTGTAGAGTGTACAAAAGACCAGGAGTAGAAGACCACCCTTCACTTCCTCGTTCACTACCAACAAGGCCATCTTCTTCCTCAAGAGCTTCTTCACACTCCTCAGACAAAAGCATCACTAAGCACAACAACGAAACATTTCACAACATAGAATTTGGGGGACAAAGTACAATGATGAACAACAACAACAATCAAGGAATCTCTATAGCTCTTGGGCTTTCCAAACAAAGCAATATCATTAGTCCTCCTCCTCCTCCTCCTACAACTACTAATTACCCTAATTCCTCAACAATAATGGCGGCTCCTCCATTTCCACTTATTGAGGATGAAGAATTACTTATGCTCACTAATATGGCTCAGCCTTTGATTATGAAGCAACAAGCTCAAGCTTCTTCTTCCTCCTTCTTCCTCACACCACCTGGTAATAATAACAACAACAATAATAATAATAATTCTTCTACCTCAGCTTCTTCATCAAATGTGGAGGATTTCAATAGGATCTTGAATTATAATCAGCTGCATCAATACTTCCACACTACTAACAACGCTCCTCCAACACATCACCACCAACAACAACAGTTATTTAATAATTTTTTGGTGCAACCTCCTCCTCATCAACCAACGGCTCTTATGGTGAGTTCTTCTTCGACCTTACCGACTGCTTTGCTTCCATTAACGACGGTGACAACCACCGCGACCACGACGGCGAACTTGATCTCGGATAGTAAACTGTGGGAGTGGAATAATCTCATCCCTGAGCCACCAAGTAACAGAGAGTATAGCAACATGTCATTCAAGTAA 1311 0.4424 MSLSHSHSHEDTTTTEAATKVDDGHELDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHDTERYQKAEISLCRVYKRPGVEDHPSLPRSLPTRPSSSSRASSHSSDKSITKHNNETFHNIEFGGQSTMMNNNNNQGISIALGLSKQSNIISPPPPPPTTTNYPNSSTIMAAPPFPLIEDEELLMLTNMAQPLIMKQQAQASSSSFFLTPPGNNNNNNNNNNSSTSASSSNVEDFNRILNYNQLHQYFHTTNNAPPTHHHQQQQLFNNFLVQPPPHQPTALMVSSSSTLPTALLPLTTVTTTATTTANLISDSKLWEWNNLIPEPPSNREYSNMSFK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2056 436 MobiDBLite consensus disorder prediction 303 330 - -
Mibi03g2056 436 MobiDBLite consensus disorder prediction 189 204 - -
Mibi03g2056 436 Pfam No apical meristem (NAM) protein 32 156 IPR003441 GO:0003677|GO:0006355
Mibi03g2056 436 MobiDBLite consensus disorder prediction 180 214 - -
Mibi03g2056 436 SUPERFAMILY NAC domain 30 177 IPR036093 GO:0003677|GO:0006355
Mibi03g2056 436 FunFam NAC domain-containing protein 35 39 180 - -
Mibi03g2056 436 MobiDBLite consensus disorder prediction 1 22 - -
Mibi03g2056 436 ProSiteProfiles NAC domain profile. 30 177 IPR003441 GO:0003677|GO:0006355
Mibi03g2056 436 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 29 317 - -
Mibi03g2056 436 Gene3D NAC domain 39 180 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2056 Mibi-ChrMibi03 55961097 55963511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2056 28 200 NAC Transcription Factor Family AT5G39820 49.500 1.21e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi03g2056 NAM 1.8e-34 No_clan