Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2051 ATGTCTGAAAGGCGGGTTTCTGATCCTAGCAAGCTTCACTTGAAGAAGAAGGACCTCACTCAAATTCGTAAAGCTGCTCGTGTTTTGAGAGATCCTGGTACTACTTCTTCCTGGAAGTCACCTCTTAGTTCATCCAGATCCCTTACTGTCCCTTCTGCTTCTGCTCCTGCATGGAAGGGCAATTTGTACAGAGGAAAAGAGAATAGAGTTTTCTTGTGCAACTGGGAGAATCACAAATCTTCAGGTAGCAACGTTGGAGTGGCAAAAAACGATGATGTAGAAGAGGAAGAAGATGACGGTGATGGAGCAAACGATGGGTCTTCTTCATCTCTTTTGGGAAGTTTTGAGGATTCCTTGAGCGATGCTAGAGGTTGTAATTTGAAGAGCAGCGCGTTCTTGAGAGATGGGAGAGGTTCTTCTGTTTCCAGGTGTAGAGAAGCTAATCATCATTCTTTGGCTAGAAGGAAAATGTTGAGTATAAAGAGGAAGAGTAAGAAACCCAACACACATTTAGATAAATCAAAATATTTGGGTAGGAAATTTGTGAATTCCAGGACTTTTGTAGAGGACTCAATTGAACAGTCTGATGATACTGAAGATTTCTGCAATTCTGAGGATTTAAGGAGGATTTTAGGGTCATCTCGTTTGCTGTTGAAACTAAAGCGTAAGAATTGGTCTCGTTCTTCCTCAAAGTTACTGAGAAGTAGTAGAACTGATGACTCTTCTTATACTTATAGTACTCCTGCTTTATCAGCCTGTTCTTATAATAGGTATGGTCGCTATAATTCAAGTACTGTGGGATCCTGGGATGCCACTACAAGCTCATTGAATGATGGTGATGATGATTTAGGCGATCATATGGATTTGCCTGGCCAGAGGGGATGTGGGATTCCTTGCTATTGGTCCAAGAGGACCCCAAAAAATAGGGGGATGTGTAGGAGTTGTTATTCTCCTTCTCTTTCAGAGACTCTGAGGAGGAAAGGAAGTAGCTTACTTTGTGGAAGTCAAGGTATCTATGCAAGACACAGAAGGTCCTTGTCAAGCTCTTCTAACAAGTGGAGATTTTCTTCAAAGAGTGCTCAGGGTGTTCTTCCACTGCTCACCAGTAGTGGTGATGTTAGAGGAGGGTCATCCTTAGGAACTGGAAGGAGCGATGATGAACTTTCTGCGAACTTTGGGGAACTTTATCTTGAGGGTTTGAGCAGGTTAGATGGAAGGAGATGGTCATCAAGTTGTAGGGGTCAAGATGGTTTGGAGATTGTGGCTGTAGATGGGGAAGGGGATGAGGATGGTGCACAAGAAAATGGTATGAGTTTTTGTCAGAAGTATAAGCCTATTTCCTTTGGTGACTTGATTGGCCAGAATATTGTTGTTCAGTCACTTATGAATGCTATTTCAAGGGATAGAATCGCTCCAATTTATCTTTTCCAGGGTCCTCGTGGTACCGGTAAAACATCAACAGCCAGGATTTTTGCTGCTGCTCTGAATTGCGCAGCTCCTGATGCAAGTAAGCCTTGTGGATACTGCAGGAATTGTGCTGATCTCAATTCTGGCAAGAGCAGGGATTTCGTGGAAGTTGATGGAACCAGTAAGCATGGGATTGATGGTGTTAGATATCTGCTGAAAAGACTATCAGTAGGATCACCATCCTCCTCCTCACGATACACTGTATTTGTGATAGATGAGTGTCACTTGCTTCCTTCTAAGACATGGCTTGCTTTTCTGAAGTTTCTGGAAGAACCGCCAAGCCGAGTTGTGTTCATATTTATAACAACTGATCTTGACAATGTACCACGGACAATTCAGTCTCGATGCCAGAAGTACCTTTTTAACAAAATTAAAGATGTTGATATTGTGGCCAGATTGAGGACACTAGCTGATGAGGAGAACCTGGATGTTGAAAAAGATGCGCTGGGCCTTATTGCTATGAATGCAGATGGTTCGCTTCAAGATGCAGAAACTATGTTAGAACAACTGAGTTTGCTGGGGAAAAGAATTACTACCTCACTTGTCAATGAACTTGTGGGTGTTGTCTCAGATGAAAAACTACTAGAACTGTTGGAGTTAGCGATGTCATCAGATACCTCAGAAACAGTGAAGAGAGCCAGAGAAGTGATGGATTCTGTGACTGATCCAATGATTTTGATTACACAAATGGCATGCCTCATTATGGACATCATTGCTGGATCTTATACTGTCATTGATACCAAGCCTAGTGATTCGTACTTTGGTGGACGAAGTTTGAATGAGTCAGAGTTGGGAAGGTTAAAGCATGCTTTGAAACTCCTCTCAGAGGCTGAGAAACAGTTAAGGACTTCTAGTGAACGCTCAACATGGTTCGCAGCTACTCTGTTACAGCTTGGTTCAATGCCTTCACCAGATCTTACCCAGTCAGGCAGTGGCAGGAGACAGAGCTGCAAGACTTCTGAATATGATCCATCAAGCACTTCAAGAGAAGTTACTGCTCCAAATCATATTTCAGATGTCGGACATATTTCTCGAATGTCAACATCCCCTCTATCTCAGCAGCGACCTTTGAATGGCAATTCTAGACATCAATGGGATGGATCGTCTAAATCAGATGGTTTCAGCTCTAGTTCAAAGCCATCAAGTAGTACAGTTCTAGGAGATGATGATGCAACACCTGCTTCATCTGATGATCTTATTGGGAATATGATGTTAAGATGTGTTAATTCAGGGAAGTTACATGATATCTGGGAAAGTTGTATAGAGAGGTGTCACTCCAAGACATTGAAGCAGCTGCTCCATAATCATGGAAAACTTGTATCTATTTGTGAAGTTGAAGGAGTTCTGGTTGTATATGTTGCATTCCGAGATAGAGATATTAAAATTAGGGCTGAAAGGTTTGTGAGCAGTATTACAAATTCAATGGAAATGGTACTTAGGTGCAATGTGGAGGTTAGAATTATTTACTTGCCAGATGGTGAAGGTGAAAATCTACCTAATATCATGCAAGCAGGACCAACATTTGGGAGTGAGAGGCGAAAAAAAGGAGACTGTGCAAATGAAAAGGGTAGTTATTCTAGTTTTCCTCCTTTGTTGGATGAAAACTTGCAGGCTATTATTGATTCATCAGATTTTACAGCTGGGAGAAACTGTGCGAGAGAGGGTGAACAGGAAATTCCCAAACAAAGAGTTGAATCTATTATACATGAGCAGAGGCTGGAAACCGCATGGCTACAAGCTGTAGGAAAAGGTTCTCCGGGATCATTGAGTCATGCAAGACCTGAGAAGAATCAGGTCCTGCCTCCAGAAAAGGTTAACTGTAAAGACCCTATAGAGTCCATTGATTCAACAAGGTTTTCCTCCCAGCATTGGGAAGATGACCTTCATCATGAAGTCAAAGTTTTGAAAGTTAAGCATGGAAGAATCATACAAAACGGTCAGATTAGTAGAAATGGAGCCCGGTATCCTATGTCCCCAAGTTTATTGCATGGTAACAGTTTAGCATCAAATCCCAACAAAGATAATCTGGGATATGAGTCAGGCTCTGGAGCTGGTGGTTGCATAGGTCGTTTATGTTGGAATAGCTGCAAGCAAAGAAGGGCAAAGGTTAGAACACAAAAGGAAAAGGTTGGACATTTTACAATATTTAGTGACTGTGGCAAGTCAATGAAAAAGGAGGTTAAAAGCTAA 3657 0.4195 MSERRVSDPSKLHLKKKDLTQIRKAARVLRDPGTTSSWKSPLSSSRSLTVPSASAPAWKGNLYRGKENRVFLCNWENHKSSGSNVGVAKNDDVEEEEDDGDGANDGSSSSLLGSFEDSLSDARGCNLKSSAFLRDGRGSSVSRCREANHHSLARRKMLSIKRKSKKPNTHLDKSKYLGRKFVNSRTFVEDSIEQSDDTEDFCNSEDLRRILGSSRLLLKLKRKNWSRSSSKLLRSSRTDDSSYTYSTPALSACSYNRYGRYNSSTVGSWDATTSSLNDGDDDLGDHMDLPGQRGCGIPCYWSKRTPKNRGMCRSCYSPSLSETLRRKGSSLLCGSQGIYARHRRSLSSSSNKWRFSSKSAQGVLPLLTSSGDVRGGSSLGTGRSDDELSANFGELYLEGLSRLDGRRWSSSCRGQDGLEIVAVDGEGDEDGAQENGMSFCQKYKPISFGDLIGQNIVVQSLMNAISRDRIAPIYLFQGPRGTGKTSTARIFAAALNCAAPDASKPCGYCRNCADLNSGKSRDFVEVDGTSKHGIDGVRYLLKRLSVGSPSSSSRYTVFVIDECHLLPSKTWLAFLKFLEEPPSRVVFIFITTDLDNVPRTIQSRCQKYLFNKIKDVDIVARLRTLADEENLDVEKDALGLIAMNADGSLQDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELAMSSDTSETVKRAREVMDSVTDPMILITQMACLIMDIIAGSYTVIDTKPSDSYFGGRSLNESELGRLKHALKLLSEAEKQLRTSSERSTWFAATLLQLGSMPSPDLTQSGSGRRQSCKTSEYDPSSTSREVTAPNHISDVGHISRMSTSPLSQQRPLNGNSRHQWDGSSKSDGFSSSSKPSSSTVLGDDDATPASSDDLIGNMMLRCVNSGKLHDIWESCIERCHSKTLKQLLHNHGKLVSICEVEGVLVVYVAFRDRDIKIRAERFVSSITNSMEMVLRCNVEVRIIYLPDGEGENLPNIMQAGPTFGSERRKKGDCANEKGSYSSFPPLLDENLQAIIDSSDFTAGRNCAREGEQEIPKQRVESIIHEQRLETAWLQAVGKGSPGSLSHARPEKNQVLPPEKVNCKDPIESIDSTRFSSQHWEDDLHHEVKVLKVKHGRIIQNGQISRNGARYPMSPSLLHGNSLASNPNKDNLGYESGSGAGGCIGRLCWNSCKQRRAKVRTQKEKVGHFTIFSDCGKSMKKEVKS 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2051 1218 FunFam DNA polymerase III subunit gamma/tau 434 612 - -
Mibi03g2051 1218 Gene3D - 430 611 IPR027417 -
Mibi03g2051 1218 MobiDBLite consensus disorder prediction 830 879 - -
Mibi03g2051 1218 Pfam DNA polymerase III, delta subunit 453 613 - -
Mibi03g2051 1218 CDD HLD_clamp_pol_III_gamma_tau 613 676 IPR045085 -
Mibi03g2051 1218 MobiDBLite consensus disorder prediction 790 883 - -
Mibi03g2051 1218 MobiDBLite consensus disorder prediction 33 54 - -
Mibi03g2051 1218 FunFam DNA polymerase III subunit gamma/tau 614 676 - -
Mibi03g2051 1218 MobiDBLite consensus disorder prediction 1073 1095 - -
Mibi03g2051 1218 SMART AAA_5 470 620 IPR003593 -
Mibi03g2051 1218 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 439 822 - -
Mibi03g2051 1218 Coils Coil 756 776 - -
Mibi03g2051 1218 Gene3D - 615 676 - -
Mibi03g2051 1218 CDD AAA 452 610 - -
Mibi03g2051 1218 MobiDBLite consensus disorder prediction 82 110 - -
Mibi03g2051 1218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 463 660 IPR027417 -
Mibi03g2051 1218 MobiDBLite consensus disorder prediction 790 823 - -
Mibi03g2051 1218 MobiDBLite consensus disorder prediction 26 59 - -
Mibi03g2051 1218 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 438 787 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2051 Mibi-ChrMibi03 55856903 55863156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2051 441 694 Core DNA Replication Machinery Family AT1G21690 24.715 1.48e-12 68.6