Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2042 ATGGAACTTTCTAGTAGAGAAGCAGAAATCCCAATCCCAATAAACAGTACTGCATATGGGGGGGAACACGGTAATGGCCACGGGCAAGAGGGGCATGGGAACATGGCCCATCACCATCAGCATCATCATCTTCACCACCACCACCAAGACCCTTCTAATGGTTCCTCCAATCTTCAAGATCATCATCATCATCTGGAGGAGGAGGACCATGGTGGGCCCTACGTGAAGAAGAAAAAGAAGAAAGAAGCAATAACAATAAGATACAGAGAATGCCTCAAGAATCATGCAGCTTCCATGGGAGGCAATTCCCTTGATGGGTGTGGTGAGTTCATGCCTAGTGGAGAAGAAGGCACCATAGAAGCCTTAACCTGCTCAGCTTGCAACTGTCACAGAAATTTCCACAGAAAAGAAGTTCAAGGTCAAACTGATGATCCCCCTCATCCCCATCCTCCTCATCCTCATCCTTCTTCTTATTACAAATTTGGAAGGAAATTCTTCTTTGGAGATCACCACCACCATCAGAGGACAGCCCCAGAACAAGCTCTTATGGGGTACCCCACAAGAACTGTACCACCAACACCACAACCACACCAGATGATACTCCCCTACAATGTGGGGCCCACAGGACCAATCCTTCCTTCAGAATCAGATGAGCAAGAGGATGCTGGTTTTGTTGGTGGTGGTGGAGGAGGATTTATGGTAATGAGTAGGCCACCACCAGCATCATCATCTCATGAGATCATAGGGATGAAGAAGAGGTTCAGGACAAAGTTCACACAGGAGCAGAAGGAGAAGATGCTTGATTTTGCAGAGAAAGTTGGGTGGAAGATTCAGAAGCAGGAAGAATCTGTTGTGCAACAGTTCTGTCAAGAGATTGGAGTCAGAAGAAGAGTGCTCAAGGTTTGGATGCACAACAACAAACACAATCTAGCCAAGAAGATTCATATCGATCCTCCACCACCACCCTCATCCCCACCACCAACAGCACCAACTACCACAACTGCTTTAGTTAGTTAA 1017 0.468 MELSSREAEIPIPINSTAYGGEHGNGHGQEGHGNMAHHHQHHHLHHHHQDPSNGSSNLQDHHHHLEEEDHGGPYVKKKKKKEAITIRYRECLKNHAASMGGNSLDGCGEFMPSGEEGTIEALTCSACNCHRNFHRKEVQGQTDDPPHPHPPHPHPSSYYKFGRKFFFGDHHHHQRTAPEQALMGYPTRTVPPTPQPHQMILPYNVGPTGPILPSESDEQEDAGFVGGGGGGFMVMSRPPPASSSHEIIGMKKRFRTKFTQEQKEKMLDFAEKVGWKIQKQEESVVQQFCQEIGVRRRVLKVWMHNNKHNLAKKIHIDPPPPPSSPPPTAPTTTTALVS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2042 338 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 87 138 IPR006456 -
Mibi03g2042 338 FunFam Zinc-finger homeodomain protein 2 240 312 - -
Mibi03g2042 338 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 53 310 - -
Mibi03g2042 338 MobiDBLite consensus disorder prediction 1 60 - -
Mibi03g2042 338 MobiDBLite consensus disorder prediction 312 338 - -
Mibi03g2042 338 MobiDBLite consensus disorder prediction 315 329 - -
Mibi03g2042 338 Pfam ZF-HD protein dimerisation region 86 138 IPR006456 -
Mibi03g2042 338 Gene3D - 240 312 - -
Mibi03g2042 338 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 88 137 IPR006456 -
Mibi03g2042 338 SUPERFAMILY Homeodomain-like 241 312 IPR009057 -
Mibi03g2042 338 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 251 307 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2042 Mibi-ChrMibi03 55751030 55752046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2042 75 313 ZF-HD Transcription Factor Family AT2G02540 53.138 9.33e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi03g2042 ZF-HD_dimer 1.6e-29 No_clan