Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2021 ATGATTTTAACATTATTTTTTTGGATTCAGTATGCAGTCAGTTCTAAAGTACGGATCAATTTTTCTCCGGCGACGTCGCATTCCACACTTTGTCAAGCTCGCCGTCGGGCTCCGTCCGCCGTTGTCGGCGCTGCGTGTTTGTTGAGCGTAATCTGGTCATCTCAAGTTGGTAACTGGAATATAATGTCTGAGGATGCTAGTCCAATGTTGGTAGTTTATGATGATCCCTCAGACCAGCGATCACTAACGCTGGATGATGCAAGCAGCACAGAGGAATCACCGGATGAAACCAGGCTCTCGTTGGAGACTTCTAATGATTCAATTCCATATATTGGGCAAAGATTTAGCACTCATGATGCTGCATATGAATTTTATAGTGAATTTGCCAAGCAGTGTGGGTTCTCAATTCGGCGACACCGTACAGAGGGAAAAGATGGTGTTGGAAAAGGACTTACTAGACGCTATTTTGTTTGCCATCGTGCTGGGAACACTCCTGTCAAAACATCAACTGAAAGTAAACCCCAAAGAAATCGAAAATCTTCTCGATGTGGATGCCAGGCTTATATGCGTATAAGCAAAACAACAGAATTAGGTACTCCAGAATGGCGTGTTACTGGTTTTGCCAACCACCATAATCATGAGCTTTTAGAACCAAATCAAGTTCGATTTCTTCCTGCATACAGAACTATTTCAGAATCAGACAAAAGCCGAATCCTTATGTATGCTAAAACTGGGATTTCTGTCCATCAAATGATGCGGCTATTGGAGCTTGAGAAGTGTGTGGAACCTGGCTATCTTCCTTTTACTGAAAAGGATGTGAGGAATTTACTTCAAACATTTAGGAAATTAGAACCTGAAGAGGAAAGCATAGATTTACTAAGAATGTGCAGAAATATTAAGGAAAAAGACCCTAATTTTAAATTTGAGTTCACACTTGATTCAAACAACTGTTTGGAGAATATAGCCTGGTCATATGCATCATCAATACAGTCATATGATATCTTTGGTGATGCTGTGGTATTTGATACAACACATCGTCTAACTGCATTCGACATGCCATTAGGTATATGGGTTGGAATGAATAATTATGGAATGCCATGCTTTTTTGGCTGTGTGCTTCTACGAGAAGAAAACTTACGGTCATATTCATGGGCATTGAAGGCTTTCTTAGGGTTTATGAATGGGAAGGCTCCGCAGACAATATTAACAGACCAAAATATGTGTCTTAAAGAAGCATTAGCCATTGAAATGCCAGCAACTAAACATGCTCTCTGCATATGGATGATTGTAGCAAAATTTCCTTCTTGGTTTAGTGCTGTTCTAGGAGAACGTTACAATGAATGGAAGGCTGAATTTTACAGACTATACAATCTTGAGTCAGTTGAAGATTTTGAATTAGGTTGGAGGGATATGGTCAGTTCTTTTGGGCTCCACGCCAGCAGGCACATTGCTAATTTGTATACTTTACGTTCGCTTTGGGCATTGCCTTTTCTGAGAAGTCATTTCTTTGCTGGAATGACTACAACTGGCCAGTCAAAGTCAATTAATGCTTTCATTCAGCGATTTCTGAGTGCACAGACCAGGCTTGCACACTTTGTGGAGCAGGTAGCTGTTGCTGTAGATTTCAAAGATCAAACTGGAGAACAACAAACTATGCAACAGAATCTTCAAAATATTTGCCTCAAAACTGGAGCCCCCATGGAGTCACATGCTGCCACAATTCTCACTCCTTTTGCCTTTTCAAAGCTTCAGGAACAACTTGTGTTGGCTGCTCATTATGCATCTTTTCCATTGGAAGATGGTTTCCTCGTGAGGCACCATACAAAAGCTGAGGGAGGTCGGAGAGTATATTGGGTTCCTCGGGAAGGAATTATAAGTTGCAGCTGCCACCAGTTTGAGTTCTCTGGAATTCTTTGTCGGCATGCTCTTAGAGTTCTTTCAACTGGGAATTGCTTTCAGATCCCAGATAGGTATCTTCCCTCTCGTTGGCGTCGAATCAGCATGACTTCTGCTAAGTTTCCACAAAATGCTCCCAAGGATCATGCTGAAAGAGTGCAGTTATTACAAAACATGGTTTCTGCTCTTATCACAGAATCTGCCAAGTCAAAGGAAAGATTGGATATTGCAACAGAGCAAGTTTCCCTCCTCCTATCTCGAATAAGGGAGCAACCAGTTTCATTACAAGGTGTTAGGGATATTTCTGGCATTGGTAGGAGTGTTTAA 2223 0.4143 MILTLFFWIQYAVSSKVRINFSPATSHSTLCQARRRAPSAVVGAACLLSVIWSSQVGNWNIMSEDASPMLVVYDDPSDQRSLTLDDASSTEESPDETRLSLETSNDSIPYIGQRFSTHDAAYEFYSEFAKQCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTELGTPEWRVTGFANHHNHELLEPNQVRFLPAYRTISESDKSRILMYAKTGISVHQMMRLLELEKCVEPGYLPFTEKDVRNLLQTFRKLEPEEESIDLLRMCRNIKEKDPNFKFEFTLDSNNCLENIAWSYASSIQSYDIFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENLRSYSWALKAFLGFMNGKAPQTILTDQNMCLKEALAIEMPATKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESVEDFELGWRDMVSSFGLHASRHIANLYTLRSLWALPFLRSHFFAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPLEDGFLVRHHTKAEGGRRVYWVPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWRRISMTSAKFPQNAPKDHAERVQLLQNMVSALITESAKSKERLDIATEQVSLLLSRIREQPVSLQGVRDISGIGRSV 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2021 740 ProSiteProfiles Zinc finger SWIM-type profile. 617 650 IPR007527 GO:0008270
Mibi03g2021 740 SMART 26again6 625 652 IPR006564 GO:0008270
Mibi03g2021 740 Pfam SWIM zinc finger 621 648 IPR007527 GO:0008270
Mibi03g2021 740 MobiDBLite consensus disorder prediction 81 103 - -
Mibi03g2021 740 Pfam FAR1 DNA-binding domain 123 216 IPR004330 -
Mibi03g2021 740 Pfam MULE transposase domain 339 431 IPR018289 -
Mibi03g2021 740 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 101 714 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2021 Mibi-ChrMibi03 55410569 55416527 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mibi03g2021 MULE 3.9e-18 CL0219