Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2011 ATGCATCATTGGATTTCTTATCAGCTAGATGATGATCGAGAAGCCCTGCTAAATAACTTTAGAACACTTGTAGATCGCTCTGTCTTGATGCAAAATGAATCAAATGATAGGTGTAGCCAATTGCCGGAGGACACACACCCTGGTTTGCATTCATCGAACACAGTAAACCCTTTGCTCATAAAGAAATCTGGATTGGGGTTGACAGAGCCACCTGAGGATGAAGCATGGCGTATTGTTATGCATATGGAACTTGCAAACAATAAACTATCTGAGCTGCCTTTGTCTCCAAGCAGCCCTGAACTCAAAGTGTTATTGTTGCAGGGAAATGTTGATTTAACAAGAATCCCAAATGCCTTTTTCTTTAATATGCCCAAGCTTTCAATCCTAGACTTATCTTACACAAGTGTACGAGATCTACCGGACTCTCTTTTTGAGTTGGAGCAGCTCAGAGAATTGTATTTGAAATGCTGTGAATGTTTCATGAAATTATCTCCAAAAATTGGAAGACTGAAGAAACTTGAGAAGCTTGATCTTGACGGAACTCAGATCATACATCTGCCAAAGGAGATGGAAGAGTTAACCAACCTCCAAAGCTTGTTCCTTTGCTTCTATGAATACCGTGGCAGAAAAGGCAAGCAATATACAAGCTCAATAATTATTCCATCTGAGGTGATCTCAAAACTCAAGAGGATAAAACATTTAAGTATTGATGTGAACCCTGATGATGAGCGGTGGTATGATAATGTACAAGACATTCTTCCAGAAATATCGGGATTAGAGCACTTGCTGACTCTTAGCCTATATATCCCACAGCTGGAACTATTACAGTTCATACCAGATCGTATATTTCAGGCTGATTTTAGATTTGTTGTTGGTAGGCATATGCAAAGGATCATATCAAGCACACCATCTACATGTAAGGAAAAGTTTAAACAAAGTGGTTGTAGCTTGGAATTTGTAAATGGTGATCATGTCCCTAATGAAATTAAAAGGGTTGTGAGGCACAGCAAGGCTTTATTTGTGGAGCGACATAAGACAATTAAGAATATGTCAGAATTTGAAATGATGAATTTAGAACAGCTGCGCGTATGTGTGTTGGCTGAATGCAGAGAAATGCAAACAATTGTTGATGGAAGGCAATCTGATAGGGGTAGTGATATTTTCTCACATTTGCTATACTTGTACGTATCACACATGAAGAGTTTAAGATGCATATGGGAAGGGCGAAAGCCACATCGCTTCTGTTTCGGTATGCTGAAGTCTTTAGTACTGCGAAATTGCCCTGAGTTAACAACTGTCTTTACCATGGATTTTTTGGGCAATCTTTCACTTTTAAAGGAGCTTATAGTTAAGGATTGTCTCAAAATAACCACCTTGATAAGTGATGCATCATTCAAACATAAGGGAGAGATTTTCCTGCCTAAATTGAGAAAGATAATGCTTCTTTATCTTCCTGAGTTGATCAACATTGCCAATGGAGGTTGCATTGGTCCAAACTTGAATAGTATGGCAATTTATGATTGCCCAAAGCTCCAAAGCTTTTCTAAGTTTGAGCTGTCAAGCCAAAATCTGAAGGTCATTAATGGAGAAATCAAGTGGTGGGACCAAGTGCAATGGAGCGAAGAAGAATGGGGAATATCGCAACGACCATCTAAGTTTGATTGCGTCTTTTCTTCAATTGATAATCAAGCTGACATTATGTCTCAGTTATGGAACGATAATGACATCGATGATGATGCAGGGATAGTGGATGAGCCAATACGACCTTCCAATGACGAGGTCTTCATGAATGGAAAGCGTTCTCGGAAGAGGGTTGTCATGCCAAGATGGCAAACACAATGCATCTTACCAAGTACAGGTTTAGAATCCCAAGCTGAGTCTCTTGATGATGGATTTAGTTGGAGGAAATATGGCCAGAAAGAGATTCTTGGAGCCAAATATCCAAGATGCACTCACGGTAATACTCAAGGTTGCCTAGCTAAAAAACATGTGCAGAGAGATGACAAGGAACCTTTTCTCATCCATACCTTCTATAGTGGTCGTCACACTTGCACACAGACATCCATTGTAACAGATCCCTCCATGAACAATCAGGTCGACTTAAGCTCTCAATCTGGGGTAGTTGATGATGATGTTCACTATCATCCAGATGATATGGATGGCAGTTCAGGGAAAGTGGATGAGCCATTACGACCTTCCAATGACGAGGATGAAAAGCATTCTCAAAAGAGAGAGGTCATGCCAAGAAGAGAACTGCAACTGCGACTGCAAGGCCATCGTCCTGCTCCTCTAAGGATACACAAAGATTCCCACAAGATTAAGAAGCCGCCGCTAGCTCTGCAGCATAGGCCTGTCGTCATCTACAGTGTCTCCCCCAAAGTTATCAACATCCCTCACGACGACTTCATGAGCGTCGTTCAACGCCTCACCGGCTCTTTATCTTCTCCTTCTTCTTCCAACAACGATAATCCCTCAGCCGCTAATCACGGCGATATGGTATCGCCAGCGGCGAATGAGAAAGCAAGGTCTCCTATGCCAAACAGAGAGATTGTACAGAGTGAGGAAGGGATTGTGGAGGTGACTGATAATGTGATTGATCGGCCTTTTAGTATGTTTCCCGGGATTTTATCGCCGGTACCCGCGGCTTTGCCTCCGATCCCAGCGAGCTTCTTCTCGCCGTCGTTAACAGCGGATCCGGCGGCCGTGAAAAATCAAGAGACACGGATTTTATAA 2733 0.4204 MHHWISYQLDDDREALLNNFRTLVDRSVLMQNESNDRCSQLPEDTHPGLHSSNTVNPLLIKKSGLGLTEPPEDEAWRIVMHMELANNKLSELPLSPSSPELKVLLLQGNVDLTRIPNAFFFNMPKLSILDLSYTSVRDLPDSLFELEQLRELYLKCCECFMKLSPKIGRLKKLEKLDLDGTQIIHLPKEMEELTNLQSLFLCFYEYRGRKGKQYTSSIIIPSEVISKLKRIKHLSIDVNPDDERWYDNVQDILPEISGLEHLLTLSLYIPQLELLQFIPDRIFQADFRFVVGRHMQRIISSTPSTCKEKFKQSGCSLEFVNGDHVPNEIKRVVRHSKALFVERHKTIKNMSEFEMMNLEQLRVCVLAECREMQTIVDGRQSDRGSDIFSHLLYLYVSHMKSLRCIWEGRKPHRFCFGMLKSLVLRNCPELTTVFTMDFLGNLSLLKELIVKDCLKITTLISDASFKHKGEIFLPKLRKIMLLYLPELINIANGGCIGPNLNSMAIYDCPKLQSFSKFELSSQNLKVINGEIKWWDQVQWSEEEWGISQRPSKFDCVFSSIDNQADIMSQLWNDNDIDDDAGIVDEPIRPSNDEVFMNGKRSRKRVVMPRWQTQCILPSTGLESQAESLDDGFSWRKYGQKEILGAKYPRCTHGNTQGCLAKKHVQRDDKEPFLIHTFYSGRHTCTQTSIVTDPSMNNQVDLSSQSGVVDDDVHYHPDDMDGSSGKVDEPLRPSNDEDEKHSQKREVMPRRELQLRLQGHRPAPLRIHKDSHKIKKPPLALQHRPVVIYSVSPKVINIPHDDFMSVVQRLTGSLSSPSSSNNDNPSAANHGDMVSPAANEKARSPMPNREIVQSEEGIVEVTDNVIDRPFSMFPGILSPVPAALPPIPASFFSPSLTADPAAVKNQETRIL 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2011 910 Gene3D Ribonuclease Inhibitor 339 533 IPR032675 -
Mibi03g2011 910 Gene3D WRKY domain 617 687 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi03g2011 910 SUPERFAMILY WRKY DNA-binding domain 624 686 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi03g2011 910 SMART LRR_typ_2 259 285 IPR003591 -
Mibi03g2011 910 SMART LRR_typ_2 170 193 IPR003591 -
Mibi03g2011 910 SMART LRR_typ_2 123 146 IPR003591 -
Mibi03g2011 910 MobiDBLite consensus disorder prediction 710 747 - -
Mibi03g2011 910 Pfam Leucine rich repeat 99 155 IPR001611 GO:0005515
Mibi03g2011 910 Pfam VQ motif 790 812 IPR008889 -
Mibi03g2011 910 Pfam WRKY DNA -binding domain 629 684 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi03g2011 910 Gene3D Ribonuclease Inhibitor 70 287 IPR032675 -
Mibi03g2011 910 ProSiteProfiles WRKY domain profile. 623 682 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi03g2011 910 SUPERFAMILY L domain-like 63 528 - -
Mibi03g2011 910 MobiDBLite consensus disorder prediction 811 850 - -
Mibi03g2011 910 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 73 528 - -
Mibi03g2011 910 MobiDBLite consensus disorder prediction 811 828 - -
Mibi03g2011 910 MobiDBLite consensus disorder prediction 691 705 - -
Mibi03g2011 910 MobiDBLite consensus disorder prediction 691 747 - -
Mibi03g2011 910 SMART WRKY_cls 628 686 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2011 Mibi-ChrMibi03 55316584 55321368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2011 599 709 WRKY Transcription Factor Family AT5G24110 44.915 1.58e-21 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi03g2011 LRR_8 6.3e-10 CL0022