Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g2007 ATGCATCATTGGATTTCTTATCAGCAAGCGGATGATCGAGAAGCCCTGCTAAATAACTTCAGAGAGCTTGTAGATCGCTCTGTCTTGATCCAAGATGAATCAGATGATGAGTGTGTCCAATTGCTGGAGGACACACATGCTGTTTTGCATTCATTGAACACAGTAAGCCCTTTGTTCATGAAGAAATCTGGATTGGGGTTGACAGAGCCACCTGAGGATGAGGCATGGCTTAGTGTTGTCCATATGGAACTTGCAAACAATAAATTATCTGAGCTGCCTCTGTCTCCAAGCAGCCCTGAACTCAAAGTGTTATTGTTGCAGGGAAATGTTGACTTAACAAGAATCCCAAATGCATTTTTCTTTAAAATGCCCGAGCTTTCAATCCTAGACTTATCTTACACTAGTGTAAGAGATCTACCGGACTCTCTTTTTGAGTTGGAGCTGCTCAGAGAATTGTATTTGAAAGGTTGTGAATGTTTCATGAAATTATCTCCAAAAATTGGAAAACTGAAGAAACTTGAGAAGCTTGATCTTGATGGAACTCAGATCATACATTTGCCAAAGGAGATGGAAGAGTTAACCAACCTTCAAAGCTTGTTCCTTTACTTCTATGAATATCGTGGCAGAAAAGGCAAGCAATATACAAGCTCCAGAATTATTCCATCTGAGGTGATCTCAAAACTCAAGGGGCTAAAACATTTAAGTATTGATGTGAACCCTGATGATAAGCGGTGGTATGATAATGTACAAGACATTCTTCCAGAAATATTGGGCTTAGAGAACTTGCTGACTCTTAGATTATACATCCCACATCTGGAACTTTTAAGTTCATACCAGACCGTATATTTCAGGTTGATTTCAGATTTGTTGTTGCGACATAAGACAATCAAGAATCTATCAGAATTTCAAATGAAGAATCTAGAACAGCTGCGCATATGTATGCTGGCAGAATGCGGAGAAATGCAAACAGTTTTTGATGGAAGAAAACCATTTTTGGGTGTTGATATTTTCCCACATTTGCTATACTTGTGCATATCACATATGAAGAGTTTAAAAAGCATATGGGAAGGGCCAATGCCACCTCGCAGCTTTCTCGGTATGCTCAAGTCTTTAATATTGCAAAATTGCCCTGAGTTAACAACTATCTTTACTGTGGATTTTTTGGGCAATCTTTCACTATTGAAGGAGCTTATAATTAAGGATTGTCCCAAAGTAACCACATTGATAAGTGATGGATCGTTCAAACATAAAGGAGAGGTTTTCCTGCCTAAATTGAGAAAGATAATGCTTCTCCATCTTCCTGAGTTGACCACCATTTCCAATGGATGTTATATAGGTCCAAGCTTGAATAAAATGTTCATTTATGATTGCCCAAAGCTCCAAAGGTTTTCTAAGTTGGAACTGTCGAGCCAAACTCTGGAGGCCATAAAGGGAGAACTCAAGTGGTGGGATCAACTGCAATGGAGGAAAGAAGAATGGGGAATATCGCAACGACCATCTAAGTTTGTTTGCATCTTTTCCTCAATTGATAATCAAGCTGCCATAATGACTCAATTATGGGATGATAATGACATTGATGATGATGCAGGAAATGCAATTGCAAAAGGGGGGATAGCGGATGCTACACACCAGTCTTCCAGTGTAACCAATTCCTTCCTAAATAGTCAGGTTGACATGATAACTCAATTTGGTGTAGATAATATGGATGACAGTTCAGTGGATGATCCATTACAATCTTCCAATGATGAGGTCTTCATGGACGAAACCCTTTCTCAGAAGAGATGCGTTCACAGAAATAGTCAAGGTTGCCTAGCTACCAAAGAGATCCAGAAAGATCATGAGAAGCCTTTCCTCAACCATGTCACATATCGTGGTCTACACACTTGCACACAGACCTCTATTGTAACAAAGTCCTCCATGAACAATCAGGTTATCAAGACAAGCAGGAGTTACAGAGCATGCTTGAGATTTAAATCCCTTAAAGAGGGAGATGAATCGCAGGGCTTGCAAAGTCAAAGAAACTTCGCAGGCGAGCCTTCGCTTGAGTGGTGTGATCCAAGAGTGCGAGTGCTTCCTGTATCAGGCGGTATGGTTGGCTATGTTTACTCATGA 2112 0.402 MHHWISYQQADDREALLNNFRELVDRSVLIQDESDDECVQLLEDTHAVLHSLNTVSPLFMKKSGLGLTEPPEDEAWLSVVHMELANNKLSELPLSPSSPELKVLLLQGNVDLTRIPNAFFFKMPELSILDLSYTSVRDLPDSLFELELLRELYLKGCECFMKLSPKIGKLKKLEKLDLDGTQIIHLPKEMEELTNLQSLFLYFYEYRGRKGKQYTSSRIIPSEVISKLKGLKHLSIDVNPDDKRWYDNVQDILPEILGLENLLTLRLYIPHLELLSSYQTVYFRLISDLLLRHKTIKNLSEFQMKNLEQLRICMLAECGEMQTVFDGRKPFLGVDIFPHLLYLCISHMKSLKSIWEGPMPPRSFLGMLKSLILQNCPELTTIFTVDFLGNLSLLKELIIKDCPKVTTLISDGSFKHKGEVFLPKLRKIMLLHLPELTTISNGCYIGPSLNKMFIYDCPKLQRFSKLELSSQTLEAIKGELKWWDQLQWRKEEWGISQRPSKFVCIFSSIDNQAAIMTQLWDDNDIDDDAGNAIAKGGIADATHQSSSVTNSFLNSQVDMITQFGVDNMDDSSVDDPLQSSNDEVFMDETLSQKRCVHRNSQGCLATKEIQKDHEKPFLNHVTYRGLHTCTQTSIVTKSSMNNQVIKTSRSYRACLRFKSLKEGDESQGLQSQRNFAGEPSLEWCDPRVRVLPVSGGMVGYVYS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g2007 703 Gene3D Ribonuclease Inhibitor 283 481 IPR032675 -
Mibi03g2007 703 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Mibi03g2007 703 Pfam WRKY DNA -binding domain 594 629 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi03g2007 703 SMART LRR_typ_2 170 193 IPR003591 -
Mibi03g2007 703 SMART LRR_typ_2 123 146 IPR003591 -
Mibi03g2007 703 SUPERFAMILY WRKY DNA-binding domain 594 631 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi03g2007 703 Gene3D Ribonuclease Inhibitor 43 252 IPR032675 -
Mibi03g2007 703 SUPERFAMILY L domain-like 39 464 - -
Mibi03g2007 703 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 18 483 - -
Mibi03g2007 703 SMART WRKY_cls 592 631 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g2007 Mibi-ChrMibi03 55236952 55241689 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g2007 594 635 WRKY Transcription Factor Family AT5G24110 47.619 7.19e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi03g2007 LRR_8 1.7e-09 CL0022