Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1997 ATGGGAAGGAAAAAGGCAGAGGAAGCTGGCCCTGCCACAAAGGCTAAGAAGGAAAAGTTCTCTGTCTCTGCCATGCTTGCCAGTATGGATGAAAAACCTGATAAACCCAAAAAAGTATCTTCTTCATCCAGTAAGCCTAAGGCAAAATCTGCTCCAAAAGTTTCTGCATATACAGATGGTATTGATCTTCCTCCCTCTGATGATGAAGATGAAGAAGTCATGGAAGAGGAGCAAGAACATAATAGTGTGCCTAAGCGGTCCGCTCAGCAGCAGAAGCCTGATTTAAAGCCTCTTGATGTGGCCGTCAGCGACAAAGAATTAAAAAAGCGGGAAAAGAAGGATATTCTTGCTGCACATGCTGCAGATTTGGCTAAGAAGGAAGCACTTAAGGATGACCAAGATGCTTTTACTGTGGTCATTGGAAGCCGAACTTCAGTGCTTGAGGGAGAAAATGATGCTGATGCCAATGTGAAAGATGTAACCATAGAAAACTTTTCTGTGTCAGCTCGTGGTAAAGAACTCCTTAAGAATGCATCAGTAAAGATATCTCATGGAAAGAGGTATGGTTTGGTTGGACCTAATGGAAAGGGGAAGTCCACACTGTTGAAGCTCCTTGCCTGGAGGAAGATACCAGTGCCAAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTTGGTGATGACAAAACAGCACTCGAAGCTGTTGTTTCAGCTAATGAAGAACTTGTTAAAACCAGACAAGAAGTGGCGCTTCTTCAAAATGCAAATTCTGTTGAAGAAAATGGAGACAGGGATGAAGATGATGGAGAGAAGCTGGCTGAGCTATATGACAAGTTACAGCTGATGGGATCTGACGCAGCTGAAGCTCAAGCATCAAAGATTCTAGCTGGATTAGGTTTCACAAAGGATATGCAGGGCCGTGCTACGAAATCATTTAGTGGGGGTTGGAGGATGAGAATTTCTTTAGCCAGAGCACTTTTTGTTCAGCCAACTCTATTATTGCTTGATGAACCAACAAATCATCTGGATCTTAGAGCTGTCCTCTGGTTGGAGGAGTATTTGTGCCGTTGGAAGAAGACTTTGGTGGTTGTCTCACATGATAGAGATTTCCTAAATACAGTTTGTAATGAGATTATTCATCTGCATGATTTGAAACTCCATACCTACCGTGGAAACTTTGATGATTTTGAAAGTGGTTATGAGCAGCGTCGCAAAGAGATGAATAAGAAATTTGAAATTTATGATAAACAGATGAAAGCAGCCAAAAGAAGTGGAAACCGGGTTCAGCAGGAAAAGGTGAAAGATCGAGCTAAGTTTGCTGCTTCTAAGGAAGCGGCAAAAAGCAAGGGCAAGGGCAAGGGCAAGGTTGATGAGGATGAAGCTCCAGTAGAGGTTCCTCAAAAGTGGAGGGATTACAGTGTTGAGTTTCATTTCCCTGAACCTACTGAACTAACACCTCCTCTGCTGCAGCTTATTGAAGTGAGCTTCAGCTATCCAAACCGCCCAGATTTCAGACTCTCAAATGTTGATGTGGGCATTGATATGGGGACTCGTGTAGCCATTGTTGGACCTAACGGAGCTGGGAAATCGACACTGCTGAATCTTCTTGCCGGTGACTTGTCTCCATCTGAGGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATCGGAAGATATTCCCAGCACTTTGTGGACCTTCTAACAATGGATGAAACACCTGTTCAGTATCTTCTTCGTCTCCATCCAGATCAGGAAGGACTCAGTAAGCAGGAGGCCGTTCGAGCAAAACTCGGTAAGTTTGGATTACCTAGCCATAATCATCTTACCCCTATCGTCAAACTATCCGGAGGGCAGAAAGCTCGGGTGGTATTCACCTCAATATCCATGTCAAAACCCCACATTTTACTATTGGATGAACCCACTAACCATCTAGATATGCAAAGTATTGATGCATTAGCTGATGCATTGGATGAATTCACTGGTGGAGTTGTTCTTGTGAGTCATGATTCTAGATTGATATCACATGTATGCGATGATGAAGAGAGGAGTCAAATATGGGTAATAGAGGATGGTACCGTCAAATTCTTTGATGGAACTTTTGAGGATTACAAGAATGAGTTGCTGAAAGAAATTAAAGCTGAAGTTGATGATTGA 2154 0.4299 MGRKKAEEAGPATKAKKEKFSVSAMLASMDEKPDKPKKVSSSSSKPKAKSAPKVSAYTDGIDLPPSDDEDEEVMEEEQEHNSVPKRSAQQQKPDLKPLDVAVSDKELKKREKKDILAAHAADLAKKEALKDDQDAFTVVIGSRTSVLEGENDADANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKTRQEVALLQNANSVEENGDRDEDDGEKLAELYDKLQLMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHTYRGNFDDFESGYEQRRKEMNKKFEIYDKQMKAAKRSGNRVQQEKVKDRAKFAASKEAAKSKGKGKGKVDEDEAPVEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISHVCDDEERSQIWVIEDGTVKFFDGTFEDYKNELLKEIKAEVDD 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1997 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 490 715 IPR003439 GO:0005524
Mibi03g1997 717 FunFam ABC transporter F family member 4 455 717 - -
Mibi03g1997 717 Pfam ABC transporter 175 341 IPR003439 GO:0005524
Mibi03g1997 717 MobiDBLite consensus disorder prediction 421 463 - -
Mibi03g1997 717 ProSitePatterns ABC transporters family signature. 313 327 IPR017871 GO:0005524|GO:0016887
Mibi03g1997 717 Pfam ABC transporter 507 642 IPR003439 GO:0005524
Mibi03g1997 717 MobiDBLite consensus disorder prediction 1 15 - -
Mibi03g1997 717 Coils Coil 405 425 - -
Mibi03g1997 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 469 705 IPR027417 -
Mibi03g1997 717 SMART AAA_5 516 692 IPR003593 -
Mibi03g1997 717 SMART AAA_5 184 385 IPR003593 -
Mibi03g1997 717 CDD ABCF_EF-3 160 386 - -
Mibi03g1997 717 FunFam ABC transporter F family member 4 158 437 - -
Mibi03g1997 717 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 113 711 - -
Mibi03g1997 717 Gene3D - 456 716 IPR027417 -
Mibi03g1997 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 404 IPR027417 -
Mibi03g1997 717 CDD ABCF_EF-3 490 692 - -
Mibi03g1997 717 Gene3D - 157 439 IPR027417 -
Mibi03g1997 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 409 IPR003439 GO:0005524
Mibi03g1997 717 MobiDBLite consensus disorder prediction 63 77 - -
Mibi03g1997 717 MobiDBLite consensus disorder prediction 1 100 - -
Mibi03g1997 717 Coils Coil 236 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1997 Mibi-ChrMibi03 54983144 54985297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1997 490 693 Calmodulin-binding Proteins AT2G36910 30.222 3.70e-13 71.2