Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1990 ATGGCTTCTGCGCTTGCCGTTATATACCTTACGTTGTCTTTCTCTTCCGCCTTCAGTTTCTCACAATCGCTGCGCTTCAGGAGAACGTTCGCATTATCTTCAATTAGATCAGTGTCACGTTCTCTCCTGAAGGCTGAAGCCATGGCTTTGATCCTATACCCCGGGATAAACACAAACAAAAATGGTTATAAGGCACTTATTGCAGCGGAGTATGTGGGTGTGCAAGTTAAGGTGGTCGAAGATTTTGAGATGGGTGTCTCAAATAAAACTCCTGAATTTCTGAAGATGAACCCTATGGGCAAGGTTCCTGTTTTGGAAACACCAGATGGTCCAATCTTTGAGAGCAATGCTATTGCACGCTATGTTGCCCGCTTGAAGGCTGACAGTCCATTATTTGGATGCTCCCCAATCGATCAGGCCCACGTTGAACAATGGATCGATTTTTCTTCATTGGAGATTGATGCTAATCTTATGGCCTGGATTAGACCAAGAATGGGATATGGTCCATACCTTCCCCCGGTTGAGGAGGCTGTGATTTCTGCTTTGAAGAGAGCATTGGGTGCTTTGAACACTCACCTTGCCTCTAATACTTACCTGGTTGGGCATTCAGTGACCTTGGCTGACATCATCATGACATGCAATTTGTATTTTGGTTACAATCGTCTCATGACCAAGAGCTTCACCTCGGAATTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAACCAGCCAAAATTCCAAAAAATTATGGGTGAGGTCAAGCAGACTGAAGCTGTCCCACCTATTCAATCCGCAAAGAAGCCTTCCCAGCCCAAAGAGTCTGCTAAACCCAAGGGAAAGGATGAGCCAAAGAAAGAGACCAAGAAAGAGGCCCAAAAGGTAGAGAAGCCTGTAGAAGAAGCTGAAGAGGAGGCGCCAAAGCCCAAGCCCAAGAATCCTCTTGACCTTCTTCCTCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACCAAAAGCAACTTCCGTGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCTGAGGGATACTCTCTTTGGTTCTGTGATTACAAATACAACGATGAGAATACTGTTTCCTTTGTGACCATGAACAAGGTCGGTGGATTTCTTCAGAGGATGGATTTGGCTCGCAAATATGCATTTGGGAAAATGCTTGTGATCGGTTCAGAACCACCATTCAAGGTGAAGGGATTATGGCTATTCCGTGGGCAAGAAATCCCACAATTTGTGATTGATGAGTGCTATGACATGGAGCTCTATGAGTGGACCAAGGTTGACATATCAGATGAAGCTCAAAAGGAGCGTGTCAATCAGATGATTGAAGATTATGAGCCTTTTGAGGGACAGCCTCTTCTGGATGCCAAATGCTTCAAGTGA 1416 0.4484 MASALAVIYLTLSFSSAFSFSQSLRFRRTFALSSIRSVSRSLLKAEAMALILYPGINTNKNGYKALIAAEYVGVQVKVVEDFEMGVSNKTPEFLKMNPMGKVPVLETPDGPIFESNAIARYVARLKADSPLFGCSPIDQAHVEQWIDFSSLEIDANLMAWIRPRMGYGPYLPPVEEAVISALKRALGALNTHLASNTYLVGHSVTLADIIMTCNLYFGYNRLMTKSFTSEFPHVERYFWTLVNQPKFQKIMGEVKQTEAVPPIQSAKKPSQPKESAKPKGKDEPKKETKKEAQKVEKPVEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDYEPFEGQPLLDAKCFK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1990 471 FunFam Elongation factor 1 gamma 128 264 - -
Mibi03g1990 471 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 135 263 IPR010987 -
Mibi03g1990 471 Pfam Glutathione S-transferase, C-terminal domain 180 245 IPR004046 -
Mibi03g1990 471 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 311 471 IPR036433 GO:0003746|GO:0006414
Mibi03g1990 471 Gene3D - 128 263 - -
Mibi03g1990 471 SUPERFAMILY Thioredoxin-like 48 132 IPR036249 -
Mibi03g1990 471 SUPERFAMILY eEF1-gamma domain 311 471 IPR036433 GO:0003746|GO:0006414
Mibi03g1990 471 Gene3D Glutaredoxin 47 122 - -
Mibi03g1990 471 SFLD Main (cytGST) 61 238 - -
Mibi03g1990 471 MobiDBLite consensus disorder prediction 272 311 - -
Mibi03g1990 471 CDD GST_N_EF1Bgamma 53 125 - -
Mibi03g1990 471 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 48 471 IPR044628 GO:0004364
Mibi03g1990 471 Pfam Elongation factor 1 gamma, conserved domain 310 418 IPR001662 GO:0003746|GO:0006414
Mibi03g1990 471 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 49 130 IPR004045 -
Mibi03g1990 471 Pfam Glutathione S-transferase, N-terminal domain 51 124 IPR004045 -
Mibi03g1990 471 Coils Coil 285 305 - -
Mibi03g1990 471 FunFam Elongation factor 1-gamma 1 311 471 - -
Mibi03g1990 471 CDD GST_C_EF1Bgamma_like 138 258 - -
Mibi03g1990 471 FunFam Elongation factor 1B gamma 47 122 - -
Mibi03g1990 471 SMART EF1G_2 310 418 IPR001662 GO:0003746|GO:0006414
Mibi03g1990 471 SUPERFAMILY GST C-terminal domain-like 121 261 IPR036282 -
Mibi03g1990 471 MobiDBLite consensus disorder prediction 259 318 - -
Mibi03g1990 471 SFLD Glutathione Transferase (cytosolic) 61 238 IPR040079 -
Mibi03g1990 471 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 311 471 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1990 Mibi-ChrMibi03 54936765 54941246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1990 48 471 Eukaryotic Initiation Factors Gene Family AT1G57720 72.877 0.0 620