Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1976 ATGGTCCCCTTGATTGTTCTCACCTTGTTCTGTCTTCTGGGTTCCTGCGTTTCTGCTTCCTCTTTACTCAGCGACTTCCGTGTCTTAGCCTCACTCAAAGAAGAGTTCCAATTCCCAGACCCTGCTCTAAGTAATTGGAACACCTCAAATTTAAGCTCAGTTTGTTCGTGGGTTGGGATTCAGTGCCACCGTGGTCGAGTAGTGTCGGTAGACTTGACAGATTTGAATCTGTATGGCTCAGTTTCTGCTTCAATTTCGAGACTTGATCGGCTCACCCACCTTTCACTAGCAGGAAACAACTTCACAGGCAGCATTGAGATCACCAACTTGAGCAGCCTTCAATACCTGAACATCTCGAACAACCAGCTCAGTGGCTCCTTGAATTGGAACTACTTCACCATGGAGAATTTGGAGGTTCTTGATGCCTATAACAACAACTTCACAGCCTTGCTTCCATTGGGGGTTTTGACTTTGAAGAAGCTCAGGCACTTGGATCTTGGTGGGAACTTTTTCTATGGCACAATCCCAGAAAGCTATGGGGATTTAGTGGGGCTAGAATATCTCTCACTTGCAGGGAATGATCTACGAGGGAAAATCCCAGGTGCGTTAGGCAATCTCAGTAACTTGAAAGAGATTTACTTGGGCTATTTCAACTCTTTTGAAGGTGGGATTCCAATGGAGTTGGGTAAGCTGGTAAATTTAGTTCACATGGATCTTTCAAGCTGTGACTTGGACGGTCCAATTCCGAAAGAACTGGGAAACTTGATAGAGCTTGATACTCTTTTCTTGCAAATCAATCAGCTATCTGGGTCCATACCAAAACAACTAGGCAACTTGACCAAGTTGGTGTACCTTGATCTTTCCAGAAACGCACTCACTGGGGAAATCCCACTTGAGTTCGTCAATCTCAGTCAGCTCAAGCTTTTCAATCTCTTGGGGAACAGATTGCATGGCTCCATACCTGACTACATTGCAGATTGGCCAGACTTAGAGTCACTTGCGCTATGGAAGAACAACTTCACAGGAGAAATCCCCCAGGGTCTTGGCCAAAATGGGAAGCTGCAAATGATTGATTTGTCCTCTAACAAGCTCACTGGTGTAATCCCACCTCACCTTTGTTCCTCAAACCAGCTTCAAATCCTGATTCTCCTAAACAACTTCCTCTTCGGTCCCATACCAGAGAGTCTGGGAACTTGTTACAGCCTCACTAGAGTAAGGTTAGGACAGAACTACCTCAATGGTAGCATTCCCGATGGTTTCCTTTACCTTCCTAACCTAAATTTTGCCGAGTTGCAGAATAACTACTTGTCAGGAACCTTGTCAGAGAACAGCAATAGTTCCTCTCAGCCTGTTAAGTTAAACCAGCTCAATTTGTCAAATAACAGCTTATCTGGTCCTTTACCAGTTTCGCTCTCAAACTTCACTTCCATTCAGATGCTTTCACTCAGTGGGAACCAATTCTCTGGTCCAATCCCTTCCTCCATTGGACAACTCCATCAAGTCCTCAGGCTTGATCTCAGCAGGAACTCATTTTCTGGAGAGATCCCACCTGAAATTGGGAACTGTTTCCACCTCACTTATCTTGACATGAGCCAGAACAACCTCTCTGGATCAATCCCAATTGAGATTTCCAACATCCACATTCTCAATTACCTAAACTTATCAAGAAACCACTTGAACCAAACCATCCCAAAATCAATTGGCACCATGAAATCTCTCACCACTGCTGATTTCTCCTTCAATGATTTCTCAGGCAAATTGCCAGAAACAGGGCAATTCTCCTTCTTCAACGCCTCCGCTTTCGCCGGCAACCCTCAACTCTGTGGCCCCCTCCTAAACAACCCTTGCAACTTCACCACAATCACAAACCCTCCAGGCAAAAACTCCACAGATTTCAAGCTCATATTCGCACTCGGCCTCCTAATCTGCTCCCTAATCTTCGCCGTCGCGGCCATACTCAAAGCCAAATCGTTCAGAAAGAACAACACAAGTTCATGGAAAATGACGTCATTCCATAAGCTCGATTTCACCGTCGCCAACATCCTCGAATGCGTCAAAGACGGAAACGTAATCGGAAGAGGCGGCGCAGGGATCGTCTACCACGGGAAAATGCCAAACGGAGTCGAAATCGCCGTTAAGAAGCTTCTAGGGTTTGGCGCAAACAGCCACGACCATGGATTCCAAGCTGAAATTCAAACCCTAGGTAACATCAGACACAGAAACATCGTGAGATTACTCGCGTTTTGCTCAAACAGAGAATCGAATCTCCTAGTCTACGAATACATGAGAAATGGAAGCTTAGGCGAAGCATTACATGGAAAGAAAGGATCGTTTCTTGTTTGGAATTTGAGATACAAGATCGCGATCGATGCGGCCAAGGGTTTGTGTTATCTTCATCATGATTGTTCGCCGTTGATTGTTCATCGTGATGTGAAATCGAACAATATTCTGTTGAATTCGAGCTATGAAGCACATGTTGCTGATTTTGGACTCGCTAAATTCTTGATTGATAGTGGGAATTCTGAGTATATGTCTACCATTGCTGGATCATATGGTTACATCGCTCCTGAGTATGCTTACACATTGAGAGTAGATGAGAAGAGTGATGTTTATAGTTTTGGGGTAGTGTTACTAGAGTTGATAACTGGGCGACGACCAGTAGGAGATTTTGGAGATGGTGTGGACCTCGTGCAATGGTGCAAGAAAGCAACAAATGGACGGAAAGAAGAGGTTATGAACATCGTGGACATGAGGCTATCAATGGTGGCAAAAGAAGAGGCAATGCACATGTTATTCATTGCTATGTTGTGCTTGCAAGAGAACAGTGTTGTGAGGCCAACAATGAGAGAAGTGGTTCAGATGCTCTCCGAATTCCCTCGGCCTGCAACCTCACAGCAAGAGAATAACAACAAAAACAGTAACAACAACAACGACCAAACATCATCTTCATATTCTCAGAACATTATGCCTCCAAGCAAAAACCTTGAGAAACAAAACCCTTGTCCTCCTACTTTCAAACAAGACCTTTTGGCTTGA 3036 0.4463 MVPLIVLTLFCLLGSCVSASSLLSDFRVLASLKEEFQFPDPALSNWNTSNLSSVCSWVGIQCHRGRVVSVDLTDLNLYGSVSASISRLDRLTHLSLAGNNFTGSIEITNLSSLQYLNISNNQLSGSLNWNYFTMENLEVLDAYNNNFTALLPLGVLTLKKLRHLDLGGNFFYGTIPESYGDLVGLEYLSLAGNDLRGKIPGALGNLSNLKEIYLGYFNSFEGGIPMELGKLVNLVHMDLSSCDLDGPIPKELGNLIELDTLFLQINQLSGSIPKQLGNLTKLVYLDLSRNALTGEIPLEFVNLSQLKLFNLLGNRLHGSIPDYIADWPDLESLALWKNNFTGEIPQGLGQNGKLQMIDLSSNKLTGVIPPHLCSSNQLQILILLNNFLFGPIPESLGTCYSLTRVRLGQNYLNGSIPDGFLYLPNLNFAELQNNYLSGTLSENSNSSSQPVKLNQLNLSNNSLSGPLPVSLSNFTSIQMLSLSGNQFSGPIPSSIGQLHQVLRLDLSRNSFSGEIPPEIGNCFHLTYLDMSQNNLSGSIPIEISNIHILNYLNLSRNHLNQTIPKSIGTMKSLTTADFSFNDFSGKLPETGQFSFFNASAFAGNPQLCGPLLNNPCNFTTITNPPGKNSTDFKLIFALGLLICSLIFAVAAILKAKSFRKNNTSSWKMTSFHKLDFTVANILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGANSHDHGFQAEIQTLGNIRHRNIVRLLAFCSNRESNLLVYEYMRNGSLGEALHGKKGSFLVWNLRYKIAIDAAKGLCYLHHDCSPLIVHRDVKSNNILLNSSYEAHVADFGLAKFLIDSGNSEYMSTIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELITGRRPVGDFGDGVDLVQWCKKATNGRKEEVMNIVDMRLSMVAKEEAMHMLFIAMLCLQENSVVRPTMREVVQMLSEFPRPATSQQENNNKNSNNNNDQTSSSYSQNIMPPSKNLEKQNPCPPTFKQDLLA 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1976 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 620 - -
Mibi03g1976 1011 Gene3D Transferase(Phosphotransferase) domain 1 762 985 - -
Mibi03g1976 1011 SUPERFAMILY RNI-like 69 389 - -
Mibi03g1976 1011 FunFam Leucine-rich repeat receptor-like kinase 24 131 - -
Mibi03g1976 1011 SUPERFAMILY L domain-like 352 609 - -
Mibi03g1976 1011 Gene3D Ribonuclease Inhibitor 219 324 IPR032675 -
Mibi03g1976 1011 ProSiteProfiles Protein kinase domain profile. 685 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1976 1011 Gene3D Ribonuclease Inhibitor 325 619 IPR032675 -
Mibi03g1976 1011 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Mibi03g1976 1011 Pfam Leucine rich repeat 160 216 IPR001611 GO:0005515
Mibi03g1976 1011 Gene3D Ribonuclease Inhibitor 25 130 IPR032675 -
Mibi03g1976 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 219 324 - -
Mibi03g1976 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Mibi03g1976 1011 Pfam Protein tyrosine and serine/threonine kinase 688 955 IPR001245 GO:0004672|GO:0006468
Mibi03g1976 1011 SMART serkin_6 685 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1976 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 132 218 - -
Mibi03g1976 1011 Pfam Leucine Rich repeat 522 537 IPR001611 GO:0005515
Mibi03g1976 1011 SUPERFAMILY Protein kinase-like (PK-like) 669 955 IPR011009 -
Mibi03g1976 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 973 - -
Mibi03g1976 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 654 761 - -
Mibi03g1976 1011 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 217 956 - -
Mibi03g1976 1011 MobiDBLite consensus disorder prediction 960 1001 - -
Mibi03g1976 1011 MobiDBLite consensus disorder prediction 960 1011 - -
Mibi03g1976 1011 Gene3D Ribonuclease Inhibitor 131 218 IPR032675 -
Mibi03g1976 1011 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1976 Mibi-ChrMibi03 54784669 54790494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1976 18 967 Receptor kinase-like Gene Family AT5G65700 57.453 0.0 1083
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi03g1976 PK_Tyr_Ser-Thr 3.3e-44 CL0016