Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi03g1963 | ATGGATCTTCTTCTGGGTATTCTTTTTCCTACTTTTGTGTTTCTCTTCACTGCTCGTTGCTCAGAGGTTATTGCTACTTCGATTCCTAGCGATGCATTGTGTCTTTTAAGGTTTAAGGATTCTCTCTCTTCTGAATCTAAGGGGTTTCTCTCTGGATGGAGAAAGGAATCTTCTGGAAGTTACTGTCAATGGCATGGTGTTACCTGCGAGAATAGGCTTTCTGGTAGAGTTATTGCTTTGAACTTGACTGGACTTCGTGGTGGTGAGATTAGTTCGTCCATTGGAGATATTTCTGAGCTTCAGGTTTTGTCTCTTCCACATAATATGTTCTCTGGTGAGATCCCTGTTACTATAGGGAAGCTTGGGTTTTTGGAGGTTATTGAACTTCAAGGTAACAATTTTTCTGGGAGGATCCCAAACCAGATGAGCTATCTTCCTTATCTTCGTTTTGTTAACCTTTCTGGTAATGCTTTTTCTGGTTCTATACCTGTTAGATTGATTGGCTCTGGAAATGTTAGTGTCATTGACTTGTCCAATAATCAGCTTTCTGGTCCACTTGTTGATGGTTTTAATACTGTTGTTGAATCTTTGAGTTATTTGAAGCTGTCACACAATTTCCTTACTGGTAAAATCCCCTCTGCAATTGGGAAATGCAGAAATTTGAGGACGCTTTTATTGGATGGGAATATTTTTGAAGGAGGCATCCCTTATGAGATTGGGTATATGACGGAGCTCAGAGTTCTAGATGTGTCTAGAAATAGTCTAACTGGAAGGATTCCGAAAGAGATAGCTGATTGCCGGAAATTGTCAGTGCTTGTGTTGACTGATTTACTCGATGATAATGGTTCCCCTGACGGGAACTTGGCGAATAGTTTCAGAGGAGAATTCAATGCTTTTATTGGGAATATTCCTCCACAGGTGTTGTTGCTTCAAAGTCTAGAGATTTTTTGGGCGCCAAGAGCGAATCTTGGGGGAAGGTTGCCTAGGGGCTGGACAGATTCATGCTCACTGAGAGTACTCAACTTGGCAGAGAATTATATCGTTGGGGGGATACCAGAAACCTTGGGGATGTGCAAGAATCTAACTTTCCTTGACTTGAGCTCTAACAGTTTGGTGGGGTATCTTCCCTCAGAGCAGCTTCAAGTCCCATGTATGGTGTACTTCAATGTAAGCCGGAATAATCTATCTGGCACACTTCCAGGATTTGGGAAGGAAAGCTGTGGTTTAACCAGAATCTTAGGTGATGCATATGTTGATATTCTTGTTTGGGAATCTCTGGTGGATGCTCTCGGTGGACCAGGTTCAGAAGATGCTGTCGTCATTAACCATGATTTCAGTTGGAATAACTTTTCAGGATCATTACCTTTATTCTCACTAGGAGATGCTACAGACAGTAAGATTTCCTACATGCTATCACTAAATAATAACAAATTCAGCGGACCTCTACCGTATCATCTGGTTTCAAACTGTAATGATATCAAGACGTTAAAGGTTAACTTGAGTGTGAACCAGCTCTCAGGTGAAAGTTCCCAAAAATTGCTTCTTGACTGTTTGCAGTTGACAGAATTTGAGGCTGCGTACAACCAGATTGCTGGTTCAATTGATCCTCATATCAGTGACTATGCAGTGCTCAAGTGCCTTGATCTGAGGGGGAATAAACTTACTGGATTTCTGCCTGATCAATTGGGAAACCTGAAAGAAATGAAATGGGTGCTTTTAGGAGGGAACAATTTAACCGGAGAAATCCCTTCTCAACTTGGTCAATTGGCGTCCCTTATTGTTTTGGATCTATCTCACAACGCTCTTACTGGCAACATTCCTGCAAGTTTGACAAATGCCACAGCTCTTGAAACTCTGCTGCTAGATCACAATAAGCTCAGTGGGGAAATACCTTCATATTTTTCCTCTCTTTCCAGTCTTGTTGGTTTTGATGTTTCTTTCAACAACCTTTCTGGTCACATTCCCCATCTTCATCACCCAAGTGATTGTAACTCCTACAAGGGGAATGTACACCTGCATAAATGCCCTGATCCATATTCTGCCTCGCCTGCTTATCTCCCTGTCCCTCTTGAAGTCCAACATTTTCATTGGCGAAAAAAAATGAAGACAGTAAAAATAGCTGCGGTCTCTTCAGTCTCTGTGGTTCTCTGTTTACTAGGAATATTTTTGGTGATCACCTTTGGAAGGAACAAGTTTGGTCGGCTCAGCAGCCTTCGAAGCAGACTACTAGTGACCTTCCAAGATGTTCCCATTGAACTCAGTTACGAAAACGTTGTCACAGCCACAGGAAATTTCAGCCTCCAAAATCTGATTGGAACCGGTGGGTTTGGATCTACTTACAAGGCTGAACTATCCCCTGGTTTCCTTGTTGCCATAAAGAGGCTGTATATAGGTAAATTCCAAGGCATCCAACAGTTTGAGACAGAGATAAAAACCTTGGGGAGAATCCGGCACAAAAACCTTGTCACTCTCATTGGCTACTATGTAGGAGGGGGTGAAATGTTCCTGATATACAACTTCCTTTCAGGTGGGAACCTTGAAACCTTCATACACAACAATTCAGATAAAAATATGTTGTGGCCAGTTATCTACAAGATAGCAATAGACATAGCAGAGGCCATAGCTTACCTTCATTATTCCTGTGTTCCTCGCATAGTTCATCGTGACATCAAGCCCAGCAACATCTTACTTGATGAGGATTACAATGCCTACCTTTCAGATTTTGGATTGGCTAGGCTCATGGAAGTATCCGAGACCCACGCCACAACTGATGTGGCAGGCACATTTGGGTATGTCGCACCTGAATATGCCACCACTTGCAGGGTTTCTGACAAAGCTGATGTTTATAGCTTCGGTGTTGTGTTACTAGAATTAATGTCTGGAAGGAAGTCACTGGATCCATCTTTTTCTGAATATGGGAATGGGTTCAATATTGTCCATTGGGCTAAGTTGCTAATGACAGAAGGTCGTTCTTCTGAACTGTTTTCACCCGCTCTGTGGGAAGCAGGACCTGAGGAGAAGCTGTTGGGGCTTTTAAAAGTTGCATTAGTCTGCACAGTGGAGACGCTTTCTATTCGGCCATCAATGAAACATGTTCTTGAGAAATTGAAACAACTTAAAAGTTGA | 3126 | 0.4223 | MDLLLGILFPTFVFLFTARCSEVIATSIPSDALCLLRFKDSLSSESKGFLSGWRKESSGSYCQWHGVTCENRLSGRVIALNLTGLRGGEISSSIGDISELQVLSLPHNMFSGEIPVTIGKLGFLEVIELQGNNFSGRIPNQMSYLPYLRFVNLSGNAFSGSIPVRLIGSGNVSVIDLSNNQLSGPLVDGFNTVVESLSYLKLSHNFLTGKIPSAIGKCRNLRTLLLDGNIFEGGIPYEIGYMTELRVLDVSRNSLTGRIPKEIADCRKLSVLVLTDLLDDNGSPDGNLANSFRGEFNAFIGNIPPQVLLLQSLEIFWAPRANLGGRLPRGWTDSCSLRVLNLAENYIVGGIPETLGMCKNLTFLDLSSNSLVGYLPSEQLQVPCMVYFNVSRNNLSGTLPGFGKESCGLTRILGDAYVDILVWESLVDALGGPGSEDAVVINHDFSWNNFSGSLPLFSLGDATDSKISYMLSLNNNKFSGPLPYHLVSNCNDIKTLKVNLSVNQLSGESSQKLLLDCLQLTEFEAAYNQIAGSIDPHISDYAVLKCLDLRGNKLTGFLPDQLGNLKEMKWVLLGGNNLTGEIPSQLGQLASLIVLDLSHNALTGNIPASLTNATALETLLLDHNKLSGEIPSYFSSLSSLVGFDVSFNNLSGHIPHLHHPSDCNSYKGNVHLHKCPDPYSASPAYLPVPLEVQHFHWRKKMKTVKIAAVSSVSVVLCLLGIFLVITFGRNKFGRLSSLRSRLLVTFQDVPIELSYENVVTATGNFSLQNLIGTGGFGSTYKAELSPGFLVAIKRLYIGKFQGIQQFETEIKTLGRIRHKNLVTLIGYYVGGGEMFLIYNFLSGGNLETFIHNNSDKNMLWPVIYKIAIDIAEAIAYLHYSCVPRIVHRDIKPSNILLDEDYNAYLSDFGLARLMEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVHWAKLLMTEGRSSELFSPALWEAGPEEKLLGLLKVALVCTVETLSIRPSMKHVLEKLKQLKS | 1041 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi03g1963 | 1041 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 297 | 1038 | - | - | |
| Mibi03g1963 | 1041 | ProSitePatterns | Protein kinases ATP-binding region signature. | 771 | 799 | IPR017441 | GO:0005524 | |
| Mibi03g1963 | 1041 | SMART | serkin_6 | 765 | 1040 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi03g1963 | 1041 | FunFam | Leucine-rich repeat receptor-like protein kinase | 28 | 188 | - | - | |
| Mibi03g1963 | 1041 | SUPERFAMILY | L domain-like | 470 | 579 | - | - | |
| Mibi03g1963 | 1041 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 841 | 1041 | - | - | |
| Mibi03g1963 | 1041 | Gene3D | Transferase(Phosphotransferase) domain 1 | 841 | 1040 | - | - | |
| Mibi03g1963 | 1041 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 729 | 840 | - | - | |
| Mibi03g1963 | 1041 | SUPERFAMILY | Protein kinase-like (PK-like) | 743 | 1036 | IPR011009 | - | |
| Mibi03g1963 | 1041 | Gene3D | Ribonuclease Inhibitor | 440 | 671 | IPR032675 | - | |
| Mibi03g1963 | 1041 | Gene3D | Ribonuclease Inhibitor | 87 | 277 | IPR032675 | - | |
| Mibi03g1963 | 1041 | Gene3D | Ribonuclease Inhibitor | 286 | 412 | IPR032675 | - | |
| Mibi03g1963 | 1041 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 438 | 683 | - | - | |
| Mibi03g1963 | 1041 | Gene3D | Ribonuclease Inhibitor | 26 | 86 | IPR032675 | - | |
| Mibi03g1963 | 1041 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 192 | 278 | - | - | |
| Mibi03g1963 | 1041 | CDD | STKc_IRAK | 771 | 1039 | - | - | |
| Mibi03g1963 | 1041 | Gene3D | Phosphorylase Kinase; domain 1 | 729 | 840 | - | - | |
| Mibi03g1963 | 1041 | Pfam | Protein kinase domain | 767 | 966 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi03g1963 | 1041 | ProSiteProfiles | Protein kinase domain profile. | 765 | 1041 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi03g1963 | 1041 | Pfam | Leucine rich repeat N-terminal domain | 29 | 69 | IPR013210 | - | |
| Mibi03g1963 | 1041 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 885 | 897 | IPR008271 | GO:0004672|GO:0006468 | |
| Mibi03g1963 | 1041 | PRINTS | Leucine-rich repeat signature | 589 | 602 | - | - | |
| Mibi03g1963 | 1041 | PRINTS | Leucine-rich repeat signature | 361 | 374 | - | - | |
| Mibi03g1963 | 1041 | SUPERFAMILY | L domain-like | 91 | 662 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi03g1963 | Mibi-ChrMibi03 | 54544649 | 54547774 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi03g1963 | 7 | 1040 | Receptor kinase-like Gene Family | AT3G02130 | 42.331 | 0.0 | 785 |
Transcription factors information