Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1960 ATGGAACTATCAGATTTACAGACCAATTCCTCCACTCACCACCACCACCACCACCATAACCACCGTCAACACCAGAACCAGAAGCAGCAGCAGCAGCAGCAAATCCCTTCTTCAACTACTACTGTGGGCCCCACCTTTGATGGCAGACCTTCTTCTTCTTCTTCTTTCATGGCCTCCATCTCCATCCAAGCTGGTCTTTCTTCTTCTTCTTCTTCAGCAACAACCACAACCACTTCCCCTTCTTCTTCTTCTTCAACATCAGCTTCTTCTTCTTCCTCTCTTTCTGCTTCTCCTTCCAACGTCTCTCTCATTGACGCTTCCTTAGCCATCGCCACCAGATCTGACTCCAATCCAGTGAAGAAGCCCCAAATTCACCACCAATTATCCATCTCCACGGCGACGGCGACGGCAAATCCTCCGAAAAGGTCCACCAAAGATAGGCACACAAAAGTAGACGGACGTGGACGGAGAATCCGAATGCCTGCTACATGTGCAGCTAGGGTTTTCCAATTAACCAGAGAATTAGGCCACAAATCCGACGGCGAAACCATCGAATGGCTCCTCCAACAAGCCGAGCCCGCCATCATCGCCGCCACCGGCACCGGAACCATTCCGGCGAATTTCTCCACCCTCAACGTCTCCCTCCGTAGTAGCGGCTCCACGATCTCCGCTCCGCCGTCGAAATCCGCTCCCCATGCTTTTCACGGCGCCGCCTTGTCCCTCACAGCTCATCATCCTCATCATCATCCTTATGACGATGCTTTCCATCATCAGCATGCTCCTTTTCTAGGGTTTCACCCTCAACACCACCACCAGAATCAGAATCAGAATCAGAATCAGAATCAGAATCAGGCTCATCTTCTGACGGCGAATCAGATAGCGGAGGCGATTCCGGTTGGTGATGGGCCGGAGAATTATTTGAGGAAGAGGTTTAGGGAGGATCTGTTTAAGGAGGATGATCAATCGCAGAATGATGGAAGTGGAGGAGGCAGTTCACCGAAGAATTTGCAGCACCAAATTCAGAAGGAGGCGGCGGCGGCGGGTGGATCTTCCGGTATTGTTCGTCCGGCGGGAGTGTTGCCGCCGGCGGCGGCGGCGATGTGGGCGGTGGCGCCGGCAGCGGCGAGTGGGGCCGGCAGCACGATATGGATGTTACCGGTGAACGCGGGTGGGCCGGGCCCGGGCTCTGGTTCGGAGGCCCAAATGTGGCAGTTCCCGGCGGCCCAAGGTGGTGCTGGGAATAGTACAGTGCAAGCTCCTTTGCAATTCATGCCTAGGTTTAATCTTCCTGGGGGAATTGAATTTCAAGGAGGTGGAGGTGGAGGGAGAGGGGGTTCTCTGCAATTGGGGTCCATGGTGATGCCTCATCAACATAATCAACAACCATCTCAACATCTTGGATTGGGTATGTCTGAATCAAATTTGGGCATGTTGGCTGCTTTGAATGCCTATTCTAGAGGTGGATTGAATGTGAATTCTGAGGAAAATCACACATTGGAGCATCAACATCATCAGCAGCAAGGAGCTGATAGTGGTGGAGAAGAAGGTCCTAATAGTTCTCAATGA 1566 0.5255 MELSDLQTNSSTHHHHHHHNHRQHQNQKQQQQQQIPSSTTTVGPTFDGRPSSSSSFMASISIQAGLSSSSSSATTTTTSPSSSSSTSASSSSSLSASPSNVSLIDASLAIATRSDSNPVKKPQIHHQLSISTATATANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTISAPPSKSAPHAFHGAALSLTAHHPHHHPYDDAFHHQHAPFLGFHPQHHHQNQNQNQNQNQNQAHLLTANQIAEAIPVGDGPENYLRKRFREDLFKEDDQSQNDGSGGGSSPKNLQHQIQKEAAAAGGSSGIVRPAGVLPPAAAAMWAVAPAAASGAGSTIWMLPVNAGGPGPGSGSEAQMWQFPAAQGGAGNSTVQAPLQFMPRFNLPGGIEFQGGGGGGRGGSLQLGSMVMPHQHNQQPSQHLGLGMSESNLGMLAALNAYSRGGLNVNSEENHTLEHQHHQQQGADSGGEEGPNSSQ 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1960 521 MobiDBLite consensus disorder prediction 1 99 - -
Mibi03g1960 521 MobiDBLite consensus disorder prediction 114 153 - -
Mibi03g1960 521 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 78 484 IPR005333 GO:0003700
Mibi03g1960 521 MobiDBLite consensus disorder prediction 26 99 - -
Mibi03g1960 521 MobiDBLite consensus disorder prediction 316 353 - -
Mibi03g1960 521 MobiDBLite consensus disorder prediction 489 521 - -
Mibi03g1960 521 MobiDBLite consensus disorder prediction 322 339 - -
Mibi03g1960 521 Pfam TCP family transcription factor 143 286 IPR017887 -
Mibi03g1960 521 ProSiteProfiles TCP domain profile. 144 198 IPR017887 -
Mibi03g1960 521 MobiDBLite consensus disorder prediction 114 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1960 Mibi-ChrMibi03 54507492 54509057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1960 103 521 TCP Transcription Factor Family AT1G58100 43.084 5.32e-66 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mibi03g1960 TCP 5.5e-40 No_clan