Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1955 ATGTCTCAACTTTGGACTTCCATGTTCTTCTCCTTCCTACTCGCCTTCCTCTTCATCTCCACCTCACCTCTTTCCTATGGGTACGATCCATTGGATCCCAATGGAAATATCACAATCACTTGGGATTTCCTCGCTGATAATGGGGACACTTACGATGTGAGGGTATGGATATACAATTGGCAACTATACCGACACGTGGAGAAGCCAGGTTGGAGGCTGAGTTGGGGATGGAGAGGTGATGAGGTGATATGGAGCATGTCAGGGGCAGAAGCAACAGAGCAAGGGAACTGTTCTAGGTTTAAGGGACAAAACAAGCCACATTGTTGTGAGAAGCAACCAACCATAATTGATCTTATGCCTGGCACACCTTATAACAAGCAAGTTCCTAATTGTTGTAAACAAGGCATCCTATCATCCCTCACTCAAGATGCCTCTGACATGACTTCCTTGTTTCAGATGAATTATAATAAACCCTCTACTCCAAACCCCAACAACATCACCCTGCCTGCTAATTTCAGCCTTGGAATCCCCGGTTACTCGTGTAGCGAGCCTACTCAGGTCCCTCCTAGCAAGTTCACCACCGATGGTCGTCGTTGGACACAAGTTCTTGAAACGTGGAATGTGACTTGTATATACTCTCAATTCTTATCATCATCAGCCCCAAAATGTTGTGTGTCATTGTCTGCTTTCTACAGTGAGACGATTGTTCCTTGCCCTAAATGCAGCTGTAATTGCCAAGGCCTACCAGGAGCAAGCTGTGTCAATTCTGATCAACCTCCTTCATTGCTGAAATTACCTCAAGAGGATAGCACACAAGAGACAGAACCAGTGGTGAGGTGTTCACAGCACATGTGTCCTATTAGGATTCACTGGCATGTGAAGCAGAACTATAGAGAATATTGGAGGGTGAAGATCACAATCACAAATTTTAACTTTGTGAAGAACTATTCTCAGTGGAATCTCGTGCTCTCACACCCTAACTTGCAGAATATAACCCAAGTCTTCAGCTTCAACCACCAACCTCTCGGAATTTTTAGTGATATCAATGATCCAGTGATGTTCTGGGGGATAAAGTACTACAATGACATGTTGCTGACACATGGGGTGAATGGGAATGTACAAACAGAGATGATACTTCACAAAGATGCTAGAAACTTCACCTTGAAAGCAGGATGGGGTTTTCCCACAACTGTTTTATTTAATGGAGATGAATGTGTTATGCCCAGTCCTGATAATTACCCTACCCTACCCAACACTTCTCCTTATCCTTGTTCTTCTTCTTTCTTGCTTTTCATATCTTTCATCCTGTCAATATTGTTACGGTGA 1326 0.4367 MSQLWTSMFFSFLLAFLFISTSPLSYGYDPLDPNGNITITWDFLADNGDTYDVRVWIYNWQLYRHVEKPGWRLSWGWRGDEVIWSMSGAEATEQGNCSRFKGQNKPHCCEKQPTIIDLMPGTPYNKQVPNCCKQGILSSLTQDASDMTSLFQMNYNKPSTPNPNNITLPANFSLGIPGYSCSEPTQVPPSKFTTDGRRWTQVLETWNVTCIYSQFLSSSAPKCCVSLSAFYSETIVPCPKCSCNCQGLPGASCVNSDQPPSLLKLPQEDSTQETEPVVRCSQHMCPIRIHWHVKQNYREYWRVKITITNFNFVKNYSQWNLVLSHPNLQNITQVFSFNHQPLGIFSDINDPVMFWGIKYYNDMLLTHGVNGNVQTEMILHKDARNFTLKAGWGFPTTVLFNGDECVMPSPDNYPTLPNTSPYPCSSSFLLFISFILSILLR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1955 441 Pfam COBRA-like protein 51 213 IPR006918 GO:0010215|GO:0016020
Mibi03g1955 441 PANTHER PROTEIN COBRA 16 431 IPR006918 GO:0010215|GO:0016020
Mibi03g1955 441 PIRSF COBRA 2 441 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1955 Mibi-ChrMibi03 54438498 54443041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1955 6 441 COBRA Gene Family AT3G02210 50.450 3.22e-165 471