Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1947 ATGGAGAGGTACGAGCTGGTGAAGGATATAGGATCTGGGAATTTTGGGGTGGCCAGGCTTATGCGCAACAAAGAGACCAAGGAGCTTGTTGCCATGAAGTACATTGAACGAGGTCACAAGATTGATGCAAATGTAGCAAGGGAAATTATAAACCATAGATCTCTTCGCCATCCGAATATAATTCGGTTCAAAGAGGTGGTACTGACTCCCACACATCTTGCAATAGTCATGGAGTATGCTGCAGGTGGAGAGCTCTTTGAGCGAATATGCAGTGCTGGAAGATTCAGTGAAGATGAGGCTAGGTACTTCTTCCAGCAGCTCATCTCAGGAGTTAACTACTGTCATTCCATGCAAATTTGCCATAGAGACTTGAAGCTAGAGAACACTTTATTGGATGGCAGCCCAGCTCCACGTCTGAAAATATGTGATTTTGGTTATTCTAAGTCGTCTCTGCTTCATTCAAGACCTAAGTCAACAGTTGGAACTCCAGCCTACATTGCACCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTAACTCTTTATGTAATGCTAGTGGGGGCATACCCATTTGAAGATCCAGAGGATCCCAGAAACTTCAGGAAAACCATAAACCGAATTATGTCAGTTCAGTACAAGATCCCAGACTATGTTCACATATCTCAGGACTGTAGGCACCTGTTATCTCGCATTTTTGTGGCGAATCCAGCAAGGAGAATTACCATCAAGGAGATCAAGTCCCACCCATGGTTTCTAAAGAACCTCCCAAGGGAATTGACAGAAGTGGCTCAAGCTGTTTACTACAGGAAAGGAAACCCAACATTTTCTCCTCAGAGTGTAGAAGACATCATGAAGATTGTTGAGGAGGCTAAAACTCCTGCCCAAGTTTCGAGGTCAGTCAGTGGATTTGGCTGGGGAGGAGAGGAAGAAGAAGATGAAGAGACAAAAGATGGGGTTGCTGCTGAGGAGGTGGAGGAGGAAGAAGATGAATATGTAAAGAGGGTCAAGGAAGCACAGGCTAGTGGAGAATTCAATGTCAGTTAA 1071 0.4463 MERYELVKDIGSGNFGVARLMRNKETKELVAMKYIERGHKIDANVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVNYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTINRIMSVQYKIPDYVHISQDCRHLLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEVAQAVYYRKGNPTFSPQSVEDIMKIVEEAKTPAQVSRSVSGFGWGGEEEEDEETKDGVAAEEVEEEEDEYVKRVKEAQASGEFNVS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1947 356 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Mibi03g1947 356 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1947 356 PANTHER SERINE/THREONINE KINASE 2 304 - -
Mibi03g1947 356 MobiDBLite consensus disorder prediction 315 337 - -
Mibi03g1947 356 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mibi03g1947 356 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1947 356 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Mibi03g1947 356 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Mibi03g1947 356 MobiDBLite consensus disorder prediction 307 356 - -
Mibi03g1947 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Mibi03g1947 356 SUPERFAMILY Protein kinase-like (PK-like) 2 291 IPR011009 -
Mibi03g1947 356 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1947 356 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Mibi03g1947 356 Coils Coil 330 350 - -
Mibi03g1947 356 CDD STKc_SnRK2 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1947 Mibi-ChrMibi03 54299885 54303952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1947 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 43.704 1.93e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mibi03g1947 Pkinase 1e-71 CL0016