Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1931 ATGGCTGTGGGCAGGAATATGATGAACTTCCAAAAGGAGTTCAAACTGGCTGTCTTGAAGTATGGAGGTCTTGAGTCTCTGTTGTTTGGTCACATGAGCAACCCCAAGAAGAGAATCAATACTATAGTTGGGAAAATTTTCAACGAAGCTCTGGGGGTATGGAACAAGGCCATGGAAACTAATTGTTACACCAAGGCTGCTGAATTTTACAGCTGCGCTATTGCAATCACCCTCGACAATGCTGTTTACTATTGCAATAGAGGAGCGGCATTGATAAAGATTGGGAAGTATCATGAAGCAGTTGGTGACTGTTATAGAGCAATTAGCCTCAACTCTACCTACTTGAAAGCTTACTATCGCTTAGGTTTAGCCTACAGTGAACAGGGCAAATATTTTGATGCTATATGTGAGGGTTTCTTAAGAGGTAGACTGAGTGAACAACTTTCTTGGCTGGACGATCAGCTGGAAGATATGAGGAAGAAAGGAATGATAAGTCGATGCAGGAAAGTAGGGAAATACAAGGAAGGGTCAGCATTAATTTACACAGGGAAATCAGAAGATGGTGGTTCTGACAAGTTTGTGTGGGTTGAAGAAGATGTCGATCCTGATTCTGTCATTGAAGAGACAATGAGTATTGCTGAATTCATCGACCTCTTCTCTCATGCCAACATGGCTCCCTAA 681 0.4229 MAVGRNMMNFQKEFKLAVLKYGGLESLLFGHMSNPKKRINTIVGKIFNEALGVWNKAMETNCYTKAAEFYSCAIAITLDNAVYYCNRGAALIKIGKYHEAVGDCYRAISLNSTYLKAYYRLGLAYSEQGKYFDAICEGFLRGRLSEQLSWLDDQLEDMRKKGMISRCRKVGKYKEGSALIYTGKSEDGGSDKFVWVEEDVDPDSVIEETMSIAEFIDLFSHANMAP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1931 226 Pfam Tetratricopeptide repeat 81 114 IPR001440 GO:0005515
Mibi03g1931 226 PANTHER LD24721P 55 136 - -
Mibi03g1931 226 SMART tpr_5 81 114 IPR019734 GO:0005515
Mibi03g1931 226 Gene3D Tetratricopeptide repeat domain 30 162 IPR011990 GO:0005515
Mibi03g1931 226 SUPERFAMILY TPR-like 55 135 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1931 61 137 U-box Gene Family AT3G07370 30.488 7.18e-06 43.9