Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1911 ATGGATACAAGAGGTAGACCTCGTGTTGTCATCAATGGAGTTCGAAGAACAAGAACATTCCATTACTTCTGGTGCCAAACTTGCCAACGCGCAATCAGAATCCCCTCTTCTACAAACCCTAATCCCTCTATTTGCCCCTTTTGCTCCCATCAATTACACCACGAGCTCGACATCACAAGACCCAACATTCTCACGAACAATCCTCCCCCTTATTCACAAATCCTCAACGGATTATCCCTCCTCCTAGATCCATCTTCCAGAGATCGAAATCGAACATTTCAATGGATCGAAGAAACAGAACAAGGACCGAATTCTCATCAAACCTGGATCACACTCCGATTTGTAAGACCTACTCGTCCACAACAAACACAGAATCCGAATTCCGCCATTGAAGATCTGCCGATGGTGAAATTGACGGAAGCAAAATTAGCGAGCGATCCGAATTGTGCGATTTGTAAGGACGAGTTTGAGATTGATATGGAAGTGAAGGAATTACCTTGCAAGCATTTTTATCATTCGGATTGTATCACTCCTTGGCTTCAAATTCACAATACATGTCCGATTTGTCGCCATGAGCTGCCAAGAGCTTCGTCTTCATCAACTTCTGGTTATTATTCGAATTTGGGTGAAGATTTCTCGCATTTTGATTATAGGTATGGATTTGGGTTTGAAGATGCTTCGTATGGATTGAATTGGATTTGGAGTCAGATTGTTTCTTTGAGACCAGTGCGTGCGGTTATGGAATGGAGTCAGAGATACTTGTTTGGTTTCCATGATGAAGATCATAACGATCGAAGAGGTGTCCCATGGTGGCGCTCATTACTCATCATATAG 834 0.4293 MDTRGRPRVVINGVRRTRTFHYFWCQTCQRAIRIPSSTNPNPSICPFCSHQLHHELDITRPNILTNNPPPYSQILNGLSLLLDPSSRDRNRTFQWIEETEQGPNSHQTWITLRFVRPTRPQQTQNPNSAIEDLPMVKLTEAKLASDPNCAICKDEFEIDMEVKELPCKHFYHSDCITPWLQIHNTCPICRHELPRASSSSTSGYYSNLGEDFSHFDYRYGFGFEDASYGLNWIWSQIVSLRPVRAVMEWSQRYLFGFHDEDHNDRRGVPWWRSLLII 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1911 277 SUPERFAMILY RING/U-box 129 196 - -
Mibi03g1911 277 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 109 194 - -
Mibi03g1911 277 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 196 IPR013083 -
Mibi03g1911 277 FunFam E3 ubiquitin-protein ligase RING1-like 113 196 - -
Mibi03g1911 277 ProSiteProfiles Zinc finger RING-type profile. 149 190 IPR001841 -
Mibi03g1911 277 SMART ring_2 149 189 IPR001841 -
Mibi03g1911 277 Pfam Ring finger domain 148 190 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1911 Mibi-ChrMibi03 53643067 53644871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1911 1 249 C3H Transcription Factor Family AT1G68180 38.372 1.38e-41 141