Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1896 ATGAGAAGAGAGAAAGTTTCGAGGATGGGAATTGATCTCTCTTTGAAGATTAATGCAAAACAAAACGAGATAGAAGAAGAAGAGAGAGAAGAGAGAGAAAGAATAATATTATTTGATGATCAGAAGAATAATAAGGAGGAAGAAGCAGTTGAACAGATCACAGAAAGTGAAATAGAAGAAGACGACGCATCAGTTGAAGAAAACTTAGCTTCTACAAAGAAGCTAAGAGGTTTAAAAATGGAGATGGTTCGTATGAAAGAGGAAAACAAAGTGTTGAGGAGAGTAGTGGAGCAAACCATGAAGGATTATTACGATCTCCAAATCAAATTGGCAGCCATAATCCATCCTCTCAACAACAACAATATTATTAACAACCAGGATCCTCAAATCTGTCTCTCACTTCAAGGCAATAATAATAATAATATTGCAAACACGAGCACGATGAGTAGTGAAGAAGAAGAAGGACCACCACCAGTACCACCGACAAACACTAATATTAAGGATATTATTAGTGAGAAAGATTTGGGATTATCACTAAGGTTACACACTACAAGAGTATCAGAAGATGAAAATGAAGATGATAGAGGCAATTTAAATATCAATATTAATAATCACAAACAAGATTTGGCTTCTTCTTCTAAGTTGAATCGGATTCATCCTCATCAACAACAACATGCTGCTGCCTCGTCTCCTCCAAATAGAAAGGCTAGGGTTTGCGTTAGAGCAAGATGTGACACAACCACTATGAATGATGGGTGCCAGTGGAGAAAATATGGACAAAAAATTGCTAAAGGAAATCCATGCCCTCGTGCCTACTATCGATGCACTGTTGCTCCAGGATGCCCTGTAAGGAAACAGGTACAAAGATGTATAGAGGACACCTCAATACTTATAACAACGTATGAAGGAACACATAATCATCCTCTACCTGTAGGTGCAACAGCCATGGCTTCTACGGCTTCCACATCAGCAGCTTCCTTCATGTTACTTCACTCTTCTTCATCACAACCCTCCACCATTACTCCTACCTCTGCTTCTTTCCCTTCTTCCTCTTCTTTCATCCCTTTCAATTACAACGCTAGTTACATCAGAACCGTAAACCCCAATAATAATGATAGTCATAATCCAGCTTCTAAACGTGCCCTTGTCTTTGATCTCACAAACAAAACTTCGTTTCCATAG 1182 0.3866 MRREKVSRMGIDLSLKINAKQNEIEEEEREERERIILFDDQKNNKEEEAVEQITESEIEEDDASVEENLASTKKLRGLKMEMVRMKEENKVLRRVVEQTMKDYYDLQIKLAAIIHPLNNNNIINNQDPQICLSLQGNNNNNIANTSTMSSEEEEGPPPVPPTNTNIKDIISEKDLGLSLRLHTTRVSEDENEDDRGNLNININNHKQDLASSSKLNRIHPHQQQHAAASSPPNRKARVCVRARCDTTTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIEDTSILITTYEGTHNHPLPVGATAMASTASTSAASFMLLHSSSSQPSTITPTSASFPSSSSFIPFNYNASYIRTVNPNNNDSHNPASKRALVFDLTNKTSFP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1896 393 Coils Coil 10 30 - -
Mibi03g1896 393 MobiDBLite consensus disorder prediction 142 164 - -
Mibi03g1896 393 Gene3D WRKY domain 234 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi03g1896 393 Coils Coil 75 102 - -
Mibi03g1896 393 FunFam probable WRKY transcription factor 31 234 311 - -
Mibi03g1896 393 SMART WRKY_cls 249 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi03g1896 393 Pfam WRKY DNA -binding domain 250 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi03g1896 393 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 50 356 IPR044810 GO:0003700
Mibi03g1896 393 SUPERFAMILY WRKY DNA-binding domain 242 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi03g1896 393 ProSiteProfiles WRKY domain profile. 244 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1896 Mibi-ChrMibi03 53474003 53477640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1896 9 367 WRKY Transcription Factor Family AT1G68150 45.187 2.80e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi03g1896 WRKY 1.2e-24 CL0274