LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi03g1884	ATGGATAGGTCAAGCCATAGTGATAAAGTGAGGGATGGTGTGAAGGGAACAATATTAATGGTGATAGTTCAGATAGTATATGCAGTGGCAAATATATTGTTAAAAATGGCAGCAAATGATGGAATGAGCTTGACTGTTCTTGTTGCCTACAGATTCCTCTTCTCGACATCCATCCACGCTCCCCTTGCTCTCTTCTTTGAAAGGGACGGCATCCAAAAAGTTGATGGCATGGTTCTATTCCAAGCTTTTCTTTGTGGCTTATTTGGGGGATCTTTATTGCATAATATCTATGCTCAATCGTTGGCCTTGGTATCTGTAACATATGTCACAGCCATGTTGAACCTTGTTCCTGCTACTACCTTCACCATGGCTGTCTTATTTAGATTGGAGAGGATGAATTTGAGAACACGAAGAGGGAAGACTAAGGTATTGGGGACATTGATAGGAATCGGTGGAGCCATGATCCTTACTTTCTGCAAAGGCAAAAGAATCCAAATCTGGACGACACATATTGAACTGTCACACCACGTGGCATTATCACATGCCTCCACCGCTGCTTCTCGCTCGTGGGGCCACCTTCTTGCTCTTGCTACATGTCTCAGTTACTCATTGTGGTTGATCATCCAGGCGAAAATGACACAGAGATTTCCATGGCAGCACTCAAGCACGGCTTTAACATGCACAATGAGCTCATTCCAATCTCTTGTGGCTGCACTTTGCATTGAGAGAGATTGGGAACAATGGAAGCTTGGCTGGAATATCAGGCTCCTGACTGCTGCTTTTACAGGGATATTGACGTCTGGGTTGGCTTACACCCTAATAGCATGGTGTGTGATGAAGAAGGGGCCATTGTTTGCGGCCATTTTCAATCCTCTCATGCTTGTGCTCGTCACCCTTGGAGGTTCTTTATTACTTGATGAGCCTCTTTATGTTGGAAGTGTAATAGGGATAGTGTTGGTGGTGTGTGGATTGTACATGGTGTTGTGGGGTAAGAGCAAGGAAACAAATAAGGCATCATTATCTTCAGAGCAATCAAGAGCCTCTACTCTTCCATGTGATGGTGATCACTCCATCTCCACCGTCAAAAATTCTGAACAGCCTCATATCAATGCCCTCGATTATTGTCCCACAAAACTCAACAATACCTAG	1149	0.4421	MDRSSHSDKVRDGVKGTILMVIVQIVYAVANILLKMAANDGMSLTVLVAYRFLFSTSIHAPLALFFERDGIQKVDGMVLFQAFLCGLFGGSLLHNIYAQSLALVSVTYVTAMLNLVPATTFTMAVLFRLERMNLRTRRGKTKVLGTLIGIGGAMILTFCKGKRIQIWTTHIELSHHVALSHASTAASRSWGHLLALATCLSYSLWLIIQAKMTQRFPWQHSSTALTCTMSSFQSLVAALCIERDWEQWKLGWNIRLLTAAFTGILTSGLAYTLIAWCVMKKGPLFAAIFNPLMLVLVTLGGSLLLDEPLYVGSVIGIVLVVCGLYMVLWGKSKETNKASLSSEQSRASTLPCDGDHSISTVKNSEQPHINALDYCPTKLNNT	382

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi03g1884	382	Pfam	EamA-like transporter family	190	328	IPR000620	GO:0016020
	Mibi03g1884	382	Pfam	EamA-like transporter family	15	157	IPR000620	GO:0016020
	Mibi03g1884	382	PANTHER	WAT1-RELATED PROTEIN	18	341	IPR030184	GO:0016020\|GO:0022857
	Mibi03g1884	382	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	245	333	-	-
	Mibi03g1884	382	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	50	160	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi03g1884	Mibi-ChrMibi03	53274414	53279156	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi03g1884	14	366	Nodulin-like Gene Family	AT1G25270	38.701	6.77e-81	250