Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1882 ATGGCAGATACCGTTGTTAGTTTTGTGCTGGAGAACTTGTCCCGGCTTGTGGCACATGAAGCCAATTTGCTGTGTGGCGTGGATGACAAAGTGAAGTTACTTGAGAGTGAACTCAGAATGATGTCTGTCTTCCTTAAAAGCTACGATCAAAACCAGAGGAAGAAGGAAATCGAACAGGAGTTTGTGCGTCAAATCACAGAAGTAGCACATGAAGCAGAGGATGTCATTGACACTTTTGTTGCCAACGTTGTCCACCACCGAAGGAGAAATCGGTTTGCCAGGATGTTACATGGTATTGACCATGCAAAGATGCTGCGCCATGTTGCAGAGAAAATAGACAACATTAAAGTTACCATCAATCATATTTATGAGAACAGAATCAAATATGACACCAAGGACGAAGCTGCAGAATCTTCAACAGATCAAGAGTTGCAGCTATTGCACAAGAGAAGAAGGGGGGTGGAGGAAGATGATGTGGTGGGATTTCAGCATGACACAAATCAAGTAATCAATCTTCTCAAACAAGGAGGTTCGAGTCGTAGTGTGGTGTCCATCATTGGTATGGGCGGATTAGGTAAAACCACTCTTGCTCGCAAGGTTTATAATAGTCCTCGTGTCAAGAATTACTTTGAGTGTCATGCTTGGGTTTATGTTTCTAATGAATATAGACCTAGAGAGCTTTTGTACGCCCTTCTTAAATGCTTCAAGTCATTCTCTGCTAATAGTTGTACCAAGCATGAGAAGAAATCAAAGGGAAAAGGAAAAGCTAAACCAGAGGATGATTACAGTTTGAGTGAGGAAGAATTGAGAGACAAGGTGCGGGAGTGTTTGATAGGGAAACATTATCTTGTAGTGTTGGATGACATATGGAATCCTCAACATTGGGATGACTTGCAGTATGCTTTCCCTGATGACAATAACGACAGTAGGATCCTCATTACTAGTCGTGTGAAAGAGGTGGCTTCTCATTCTAGCTCATCCCCACCCTACTATCTCCCTTTTCTTAATGAAGAACAAGGTTGGGAGCTTTTCTCAAAGAGGGTGTTCCGAGGTGAAGCCGTGCCTTCTGATCTAGAGCCATTGGGTAAGTGCATGGTAAAAAGTTGTGGTGGCTTGCCATTATCCATTGTGGTACTTGCGGGAATTCTAGCCAAGAAGGATAAGTCATACCGAGAATGGTCCAAGATCATGGGCCATGTCAACTCGTATATCACTCGACCAGAAACACAAGTACATGATATAGTACTTAAACTTAGTTATGATAGCTTACCTCAAAGATTGAGGCCATGCTTTCTATATTTTGGTATGTTTCCTGAAGATTATGAGATTCCTGTTAGACGTTTGATCCGATTGTGGGTTGCTGAAGGATTCATTTTTCATAGTGATTCTAGAGTTGCAGAGGATGTTGCAGAGGACTACTTGGATGAACTGATTGACCGTAATTTAATCCAAGTAGGGAGAAGGAGGAGTGATGGGGGTATTAAGACATGTCGCATCCACGATTTATTAAGAGAACTTTGCATATCCATGAGCAAGGAGGAGAAAATATTTGAAGTCTGTGGGGATGTAGGCATTTCAGAGCAAACCAAACCTCGGAGGCTTTCCATTCAGTGCGATCTATCTGATTACTTTGCCTCAAGCAACAAAGACCATTCACACACCCGTTCTGTGATTTGCTTTGGGCATGACTTCAGATTTCACCTTGATTCAAGCAATTTAAAAAGGTTTGTGAAATGGTTTAAGCTTGTTCGAGTGTTAGATCTAAGGATTCCAGTGCTTTGGAAGCATGAGATCTCTACACGTTTAAACATGTTAGTGCATCTAAGGTACCTAAGAATCGACCTGAGTAATCGGTTTAGTCAGACATATGTCACAAAGATTCCTAGATTAGTTTGCAATCTATGGAATCTGGAATGTTTGGACATTGGGCATTCCATATGGGAACGTTCCCTACCATTCCCTAGTGGAATGTGGAATCTCAAGAGACTAAGGCATCTTTATTCAGTTCAACCTGTGATTTTACCTGAGGTTCCAGATGTAAAAACTAAGACGATGTGGAATCTACAAACCCTATCATATGTTGTCATAGACAAAAAATCAGCCATTATGTCTTTAATAGGGAAAGGCTTATTCCCAAAGCTTAGGACATTGGGTTTGTTTTTCGAAAAGGATGAACAAAAAAAACAGAGGCTTCTCCAAGTTTGGGAAAACCTTCCAAACCTAAGGTGTCTGAATTCATTGAAAATTTGTTGCTTTCCTGATGTTTCAACATCTGTCAATTCCTTTCCTTTCAGTCTTACCAAGCTAACAATCATGGAAACCTACTTAAGCAATGATGTCATGGGCACTTTAGGGAGTCTTACCAACCTCAGAATTTTGAAATTTTGGTCTTGTAAAGTTACAAAAGTCTCAATTTTTGAAGAGTTAAAGCTTTGTTGCATTAATGGGTTCCCCCAACTAGAGGTATTTCAAATGGAACTTATGAGGATGCTACGTTGCTGGGAATTAGGTAAAGATGTAATGCCATGTCTCAGACGTTTGATCATTGTAGATTGCGATGGGCTGATTGCTCTCCCTAATGAGCTCTGGTCACTGACTTACTTACGAGAGGTACAAGTACAAAGGCCTTCTAAATCACTGAAGGTGCAACTCCAAAGGCAACCCATGAGAGATGGATGCAATCTCATCATTTCTTAA 2697 0.4097 MADTVVSFVLENLSRLVAHEANLLCGVDDKVKLLESELRMMSVFLKSYDQNQRKKEIEQEFVRQITEVAHEAEDVIDTFVANVVHHRRRNRFARMLHGIDHAKMLRHVAEKIDNIKVTINHIYENRIKYDTKDEAAESSTDQELQLLHKRRRGVEEDDVVGFQHDTNQVINLLKQGGSSRSVVSIIGMGGLGKTTLARKVYNSPRVKNYFECHAWVYVSNEYRPRELLYALLKCFKSFSANSCTKHEKKSKGKGKAKPEDDYSLSEEELRDKVRECLIGKHYLVVLDDIWNPQHWDDLQYAFPDDNNDSRILITSRVKEVASHSSSSPPYYLPFLNEEQGWELFSKRVFRGEAVPSDLEPLGKCMVKSCGGLPLSIVVLAGILAKKDKSYREWSKIMGHVNSYITRPETQVHDIVLKLSYDSLPQRLRPCFLYFGMFPEDYEIPVRRLIRLWVAEGFIFHSDSRVAEDVAEDYLDELIDRNLIQVGRRRSDGGIKTCRIHDLLRELCISMSKEEKIFEVCGDVGISEQTKPRRLSIQCDLSDYFASSNKDHSHTRSVICFGHDFRFHLDSSNLKRFVKWFKLVRVLDLRIPVLWKHEISTRLNMLVHLRYLRIDLSNRFSQTYVTKIPRLVCNLWNLECLDIGHSIWERSLPFPSGMWNLKRLRHLYSVQPVILPEVPDVKTKTMWNLQTLSYVVIDKKSAIMSLIGKGLFPKLRTLGLFFEKDEQKKQRLLQVWENLPNLRCLNSLKICCFPDVSTSVNSFPFSLTKLTIMETYLSNDVMGTLGSLTNLRILKFWSCKVTKVSIFEELKLCCINGFPQLEVFQMELMRMLRCWELGKDVMPCLRRLIIVDCDGLIALPNELWSLTYLREVQVQRPSKSLKVQLQRQPMRDGCNLIIS 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1882 898 SUPERFAMILY L domain-like 498 874 - -
Mibi03g1882 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 434 IPR027417 -
Mibi03g1882 898 MobiDBLite consensus disorder prediction 245 264 - -
Mibi03g1882 898 CDD RX-CC_like 2 122 IPR038005 -
Mibi03g1882 898 FunFam Probable disease resistance protein At1g63360 420 509 - -
Mibi03g1882 898 Gene3D - 138 327 IPR027417 -
Mibi03g1882 898 Pfam NB-ARC domain 165 420 IPR002182 GO:0043531
Mibi03g1882 898 Pfam Rx N-terminal domain 5 91 IPR041118 -
Mibi03g1882 898 Gene3D Ribonuclease Inhibitor 549 890 IPR032675 -
Mibi03g1882 898 Gene3D - 420 510 IPR036388 -
Mibi03g1882 898 Gene3D - 334 419 IPR042197 -
Mibi03g1882 898 PRINTS Disease resistance protein signature 785 801 - -
Mibi03g1882 898 PRINTS Disease resistance protein signature 369 383 - -
Mibi03g1882 898 PRINTS Disease resistance protein signature 182 197 - -
Mibi03g1882 898 Gene3D - 5 115 - -
Mibi03g1882 898 FunFam Probable disease resistance protein At1g61300 142 328 - -
Mibi03g1882 898 PANTHER DISEASE RESISTANCE PROTEIN RP 32 852 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1882 Mibi-ChrMibi03 53238763 53241459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1882 183 590 WRKY Transcription Factor Family AT5G45050 23.614 5.36e-09 58.5