Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1865 ATGTATAAATATAAATCCGTGTGTGAAGAACAGCTGCCGCCGCCAGCCGCTTCCATCCTCTCAGTCTCACAGTCTCACTGCGTTGCTTTTCCTGGACGGCGAATCAACTTGGGACTTAATCGGAGAATAATTCCCTCACCTCCGATTGTATTTGTTCATGTGAAGAAGTTTTCTTTATCCTCTTTACTTATGCAGTTTGAGATGTCTGATGTGGAAGAGTACCGCTGTTTCGTTGGTGGCCTTTCTTGGTCAACATCTGATAGGAAGTTAAGAGATTCATTTGAGAAGTTTGGAAACCTTCTTGAAGCCAGGGTGGCTGTTGACAAGATCTCAGGCCGCTCTCGTGGTTTTGGATTTGTAACATTTGATGATCATAAAGCTATGGAAGAAGCCATTGAGGCTATGAATGGGATGGATTTAGATGGTCGGACTATCACTGTTGATAAAGCAAAACCTCAACAAGGATCAGCTAGAGATGATGGTGATAGGTACCGGGAACATGGCCGGGATCGCAATCAGAGACGAGATTATGGAGGTGGTCGAGGTTCTAACGGTGGTGAGTGCTTTAAGTGTGGCAAACCTGGTCATTTTGCTAGAGAGTGTCCCAGTGAAGAGGGAAGAGGTGGAAAGTATGGTGGCAAAGAAAGTAGATATGGTAACAGTGGTGGTGGAGGTCGCTATGGTCCTGATAGGAACTCTGATCGTTATTCTGGTGGGCGAAACAGGGATGCTGATAGGTATGGGGATCATGGAAATGATCGATATAATAGTCGTAGTGATCGTGGTGGACCTTATGAGAGGCGAGGAACAGGAGGCTCTCGTTCTGGATAG 831 0.4597 MYKYKSVCEEQLPPPAASILSVSQSHCVAFPGRRINLGLNRRIIPSPPIVFVHVKKFSLSSLLMQFEMSDVEEYRCFVGGLSWSTSDRKLRDSFEKFGNLLEARVAVDKISGRSRGFGFVTFDDHKAMEEAIEAMNGMDLDGRTITVDKAKPQQGSARDDGDRYREHGRDRNQRRDYGGGRGSNGGECFKCGKPGHFARECPSEEGRGGKYGGKESRYGNSGGGGRYGPDRNSDRYSGGRNRDADRYGDHGNDRYNSRSDRGGPYERRGTGGSRSG 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1865 276 SMART rrm1_1 75 148 IPR000504 GO:0003723
Mibi03g1865 276 MobiDBLite consensus disorder prediction 153 177 - -
Mibi03g1865 276 MobiDBLite consensus disorder prediction 146 276 - -
Mibi03g1865 276 Gene3D - 184 244 - -
Mibi03g1865 276 MobiDBLite consensus disorder prediction 193 212 - -
Mibi03g1865 276 MobiDBLite consensus disorder prediction 233 267 - -
Mibi03g1865 276 SUPERFAMILY Retrovirus zinc finger-like domains 169 209 IPR036875 GO:0003676|GO:0008270
Mibi03g1865 276 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 68 271 - -
Mibi03g1865 276 Pfam Zinc knuckle 187 203 IPR001878 GO:0003676|GO:0008270
Mibi03g1865 276 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 74 152 IPR000504 GO:0003723
Mibi03g1865 276 Gene3D - 65 183 IPR012677 -
Mibi03g1865 276 SUPERFAMILY RNA-binding domain, RBD 66 182 IPR035979 GO:0003676
Mibi03g1865 276 ProSiteProfiles Zinc finger CCHC-type profile. 188 203 IPR001878 GO:0003676|GO:0008270
Mibi03g1865 276 SMART c2hcfinal6 187 203 IPR001878 GO:0003676|GO:0008270
Mibi03g1865 276 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 77 146 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1865 Mibi-ChrMibi03 53034558 53036246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1865 76 165 Eukaryotic Initiation Factors Gene Family AT4G34110 34.444 1.02e-07 50.8