LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi03g1840	ATGAGTCACCGTATTAGCGATGAGGTTGTGGATAGGGTGACAGAAGAAATTAAAAGTGGGCATTCTTCTCGTCGATATGAGAGATCTATTCATAAGGTGGGAGCTCCTCCCAAGCAAAATCTTCTCAAAGAGATCAAAGAGTCTGTAATGGAAACTTTCTTTGCAGACAAGCCCTTAAGCCACTTTAAGGACCAACCTGCATCCAGAAAGTTTGTTCTTGGCCTACAAGCAGTTTTCCCTATTCTTGACTGGGGAAGAAGCTACAATCTTAGTAAATTTAAAGGAGATCTCATTGCTGGACTCACCATTGCAAGTCTCTGTATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGAAACCACAGTATGGACTCTATGCCAGTTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATAGCCATAGGACCTGTGGCTGTGGTATCCCTTTTGCTTGGGAGTATGCTGACAGATGAGATAAGTGACTACAAAAGTCATGACTATCTTCGTCTCACATTTACTGCCACCTTTTTCGCGGGAATCACTCAAATGGCACTTGGAGTTCTCAGGCTTGGTTTCTTGATTGACTTCTTATCTCATGCTGCCATCGTGGGATTCATGGCCGGAGCTGCCGTTACGATAGCCCTGCAGCAGCTTAAAGGATTGCTTGGAATAAAAAACTTCACCAGGAGTACTGACATAATTTCTGTGATGCGCTCAGTTTGGAGTAATGTGCACCATGGGTGGAATTGGCAGACAATAGTCATTGGATTAGCATTCTTGGCTTTCCTCCTTGCAACTAAGTATCTGGCTAAAAAGAAAAAGAAACTCTTTTGGGTGTCTGCACTTTCTCCTTTGGTGTCTGTTATACTGTCCACCCTTTTTGTTTACATTACTCGTGCTGACAAGAAAGGTGTTGCAATTGTAACTCACATAGACAAGGGAGTGAATCCATCATCTGCAAGTGAAATTTTTTTCAGTGGAAAATATATTGGCGCTGGTATTCGGATTGGTGTCATAGCTGGTTTGATTGCACTCACAGAAGCTGTAGCAATTGGGAGAACATTTGCTGCTATGAAAGATTATCCGTTGGATGGTAACAAAGAAATGGTTGCAATGGGGACGATGAATATTATTGGTTCACTGACATCTGCGTATGTAGCTACAGGATCCTTTTCACGATCAGCAGTAAACTACATGGCTGGCTGTCAAACTGCTGTATCAAATATCATTATGTCAATAGTTGTGTTATTAACCCTGGTGTTCATAACACCACTTTTTAAGTACACCCCAAATGCAGTGCTTGCTTCCATTATAATTGCTGCTGTGATAGGCCTCATTGACATTGATGCAGTCATTCTGCTATGGAAGATTGACAAATTTGATTTTCTAGCCTGCATAGGAGCCTTCTTTGGTGTGATTTTCAAAAGTGTTGAGATTGGCCTTCTTATCGCGGTGGCCATATCATTTGCTAAAATCCTTTTGCAAGTGACAAGGCCAAGGACCGTGGCACTTGGGAAGCTTCCAGGGACCAAAGTGTACAGGAACATTTATCAATACCCAAATGCTACACAGATTCCCGGAATGCTAATTATTAGAGTTGACTCTGCAATCTACTTCTCAAATTCCAACTATATCAAGGACAGAATTTTGAGATGGCTGCAAGATGAAGATGAGCACAGGAAAGAAAGTAGTTTCCCCAGAATACAGTATCTAATTGTTGAAATGTCACCTGTTACTGACATTGACACTAGTGGCATCCATGCCTTTGAAGATTTATACAGGAGCCTTCTGAAAAGAGAGGTCCAGCTTCTCTTGGCAAATCCTGGGCCAATTGTAATGGAGAAGCTCTATGCATCCAAATTGGCGGACGTGATCGGGGAAGACAAGATCTTTCTATCAGTGGGTGATGCTGTTGCAACTTTTGGTTCAAAAGCTGAAGAAGTTTAA	1965	0.4198	MSHRISDEVVDRVTEEIKSGHSSRRYERSIHKVGAPPKQNLLKEIKESVMETFFADKPLSHFKDQPASRKFVLGLQAVFPILDWGRSYNLSKFKGDLIAGLTIASLCIPQDIAYAKLANLKPQYGLYASFVAPLVYAFMGSSRDIAIGPVAVVSLLLGSMLTDEISDYKSHDYLRLTFTATFFAGITQMALGVLRLGFLIDFLSHAAIVGFMAGAAVTIALQQLKGLLGIKNFTRSTDIISVMRSVWSNVHHGWNWQTIVIGLAFLAFLLATKYLAKKKKKLFWVSALSPLVSVILSTLFVYITRADKKGVAIVTHIDKGVNPSSASEIFFSGKYIGAGIRIGVIAGLIALTEAVAIGRTFAAMKDYPLDGNKEMVAMGTMNIIGSLTSAYVATGSFSRSAVNYMAGCQTAVSNIIMSIVVLLTLVFITPLFKYTPNAVLASIIIAAVIGLIDIDAVILLWKIDKFDFLACIGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTVALGKLPGTKVYRNIYQYPNATQIPGMLIIRVDSAIYFSNSNYIKDRILRWLQDEDEHRKESSFPRIQYLIVEMSPVTDIDTSGIHAFEDLYRSLLKREVQLLLANPGPIVMEKLYASKLADVIGEDKIFLSVGDAVATFGSKAEEV	654

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi03g1840	654	PANTHER	SULFATE TRANSPORTER	42	646	IPR001902	GO:0016020\|GO:0055085
	Mibi03g1840	654	ProSiteProfiles	STAS domain profile.	524	647	IPR002645	-
	Mibi03g1840	654	FunFam	Sulfate transporter 31	504	650	-	-
	Mibi03g1840	654	Gene3D	STAS domain	504	650	IPR036513	-
	Mibi03g1840	654	Pfam	Sulfate permease family	93	472	IPR011547	GO:0016020
	Mibi03g1840	654	SUPERFAMILY	SpoIIaa-like	525	648	IPR036513	-
	Mibi03g1840	654	Pfam	STAS domain	525	643	IPR002645	-
	Mibi03g1840	654	CDD	STAS_SulP_like_sulfate_transporter	525	640	-	-
	Mibi03g1840	654	ProSitePatterns	SLC26A transporters signature.	122	143	IPR018045	GO:0008271\|GO:0008272
	Mibi03g1840	654	TIGRFAM	sulP: sulfate permease	80	643	IPR001902	GO:0016020\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi03g1840	Mibi-ChrMibi03	52517545	52521666	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi03g1840	20	653	Inorganic Solute Cotransporters	AT4G08620	69.764	0.0	902