Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1839 ATGGAAGTTTTATCCTTAAGATCATCCTTAATTGTTCCCTATAGGCCCTCTCATAGCCTTAATCCACTCTTAAAAACTTTGCAAAGCCAAAAGCTTCATGTTGTTCAACGTGTGTCATGCCAAGCAAGAAAGTTAGCCGTTGAGGATGAAGAGACAGCTTCTAAAGACTTTTACAAGATGCTATCTTTGAATCCGAAGAGTGCGACTAGAGATGATATCAAGAAGGCTTATCGAACAATGGCCCTTCAATATCACCCAGACATGTGTCAAGATCCTTCGAGGAAGGAGAAGTGTACGAGGATGTTTGTGCAGCTTCATGTAGCTTACGAGACATTATCCGACCCAGTGCTTCGAGAACAATATGATTATGAACTCGGCTTAATCACAAGCAAGACAAATGATAAGAGTGTTAATGGTGGTGGTGAAACTGAAACATGGAGAAGAAGGTGGGAAGAGCAATTGGTTGAGTTGAAGAGAAGGTCTAATACAAGAATGGCTCAAAAGGAAGGATCATCATGGGGAAGTAGAATTAGGGCTCAAAACATGAAAAATCATAATTAA 561 0.4029 MEVLSLRSSLIVPYRPSHSLNPLLKTLQSQKLHVVQRVSCQARKLAVEDEETASKDFYKMLSLNPKSATRDDIKKAYRTMALQYHPDMCQDPSRKEKCTRMFVQLHVAYETLSDPVLREQYDYELGLITSKTNDKSVNGGGETETWRRRWEEQLVELKRRSNTRMAQKEGSSWGSRIRAQNMKNHN 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1839 186 CDD DnaJ 56 114 IPR001623 -
Mibi03g1839 186 PRINTS DnaJ domain signature 97 117 IPR001623 -
Mibi03g1839 186 PRINTS DnaJ domain signature 59 77 IPR001623 -
Mibi03g1839 186 PRINTS DnaJ domain signature 77 92 IPR001623 -
Mibi03g1839 186 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 22 184 - -
Mibi03g1839 186 Gene3D DnaJ domain 44 149 IPR036869 -
Mibi03g1839 186 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Mibi03g1839 186 SMART dnaj_3 55 117 IPR001623 -
Mibi03g1839 186 Pfam DnaJ domain 56 122 IPR001623 -
Mibi03g1839 186 SUPERFAMILY Chaperone J-domain 12 121 IPR036869 -
Mibi03g1839 186 MobiDBLite consensus disorder prediction 160 186 - -
Mibi03g1839 186 ProSiteProfiles dnaJ domain profile. 56 125 IPR001623 -
Mibi03g1839 186 MobiDBLite consensus disorder prediction 166 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1839 Mibi-ChrMibi03 52510922 52511482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1839 22 133 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.043 2.53e-06 45.1