Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1828 ATGGGGTTCCCACTTTTTATCCTTGAACATGTTCTCCTTGCTGTTCTTCTTGCTGCACAAGTAATGAACACACTTGTCATGGCTCAAGATAGCCCTTTTGGTAATCATGTAGAGAAAGATGCTCTTCATGATCTCAAGGCCGCTTTCAATGACCCTTTTCTGAATTACAACTGGATTGGCTTCCCCTGCAATGAGACTGAACCATCAAGATGGTTTGGGATTCGGTGTAGTACAAGTGGTCGAGTCACTGGCATAGTACTGGAAGGTATGGGGCTGACCGGAAAAATCAATGTCAGGGCATTCTTCAACCTTACAGAACTGTCTATTCTGAGCTTCAAGAACAATTCCCTGAAGGGAAATGTGATGGATTTCTCTAACGGTCATCGCTTGAAGTATATTGATTTATCAGGCAATGAGTTTGATGGGCCAATACCAAGATCCCTTCTGAATCTTAACCTCTTGGAAACATTGTTACTGCAACACAATAAGCTCACAGGTCCTATTCCAGAGTTCAATCAACCCAGTTTGAGGATGATCAATGTGTCAGGCAATGATCTTTATGGCAGAATTCAAGCAACTCAAACTTTTCAATCACTGGGGCCTGATTCATTTTCTGGCAAACCCAATTTATGTGGTCCTCCTCTCAATTCCTGCAGCACTAGCTTGAAAGCTTCAATGCCAACACCAGGAGGCTACTCAGAAAACGATGAGGCAGCAAACCAGAGTGGATCTTCAAACAAAGACAACACTTCTACTATTCTGATAATTTTCAATGTGGTTCTTTTACTTGCAATAATCTTGCTAGCTTTTCTTTACTACAAGACAGCTAAGAAGCTCAACAACATTATGAAACAGCAGATTCCTATTAATAAGGATGTAATGGAGAGTACTGTTGATAAGATCGAAATGAGAGATCGTCACAGTTCTGTAGTTATGGCAGTGGAAGAGAAGAAGGAGCTTATATTCTTTACGGATGAACCAAAGTTTCAAATGAATGAACTCCTAAAGGCTTCTGCTGAGACACTGGGTCAGGGAATCATGGGGAATAGTTACAAGGCTATACTGAATGGAGGAATCTCCATTGTTGTAAAGCGGCTAAGGGACTTGAAGCCAATGACAAGAGAGGAGTTTGCAAAGCAATTGCATGAAATTGCTGATCTCAAGCATCCAAATTTGTTGCCTTTGCTTGCTTACTACAACTCCAAAGATGAGAGGCTGCTGCTCTACAGATATGCAGAGAAGGGAAATCTTTTCTTCAGGCTTCATGCAAACAGAAGTGGAAACCGGATTCCATTCCCATGGAACTCAAGATTATCAGTAGCAAAAGGGGTAGCCAGAGCATTAACTTACCTCCATCTCAATGCCAAACCCAACAACACTGACACCTTACCCCCCCATGGAAACTTAAAATCCTCAAACATCCTCCTAGACCAAAACGACACCGTTTTAGTCTCAGACTACGGACTCACCTCCCTCATAGCACAACCCATCGCATCTCAACGCATGGTCGTTTACAAATCACCAGAATACACCCACACAAAAAAAGTATCAAAACACTCAGATGTATGGAGCTATGGAAGCCTTCTAATAGAACTACTAACAGGAAGATTATCAATATGTTCGGCCCCACCTGGTATTAACGGCTCAGATCTTTGCAGCTGGGTCCACCGAGCAGTGAGGGAGGAATGGACAGCTGAGATATTCGATAAGGAAATATCTGCACAACGAACTGCACTTCCTGGGATGTTGAGGTTGCTTCAGATTGCGATGAGGTGTACGGAGAGGTACCCTGAGAATCGGCCTGATATGAGGGAGGTTGTGAGGGAAGTAGAGAAAATTGAGGTGGTTCCATGGATGACTACTAATACATCGGAAGATGAAGAAGATGTGTCTGGTGATAGGTCTATAACAACAGATGATTCTATGTATTCAACTAGTACTACTACGTCTGGGATTGTTGGTGATGATAGGTAG 1974 0.4271 MGFPLFILEHVLLAVLLAAQVMNTLVMAQDSPFGNHVEKDALHDLKAAFNDPFLNYNWIGFPCNETEPSRWFGIRCSTSGRVTGIVLEGMGLTGKINVRAFFNLTELSILSFKNNSLKGNVMDFSNGHRLKYIDLSGNEFDGPIPRSLLNLNLLETLLLQHNKLTGPIPEFNQPSLRMINVSGNDLYGRIQATQTFQSLGPDSFSGKPNLCGPPLNSCSTSLKASMPTPGGYSENDEAANQSGSSNKDNTSTILIIFNVVLLLAIILLAFLYYKTAKKLNNIMKQQIPINKDVMESTVDKIEMRDRHSSVVMAVEEKKELIFFTDEPKFQMNELLKASAETLGQGIMGNSYKAILNGGISIVVKRLRDLKPMTREEFAKQLHEIADLKHPNLLPLLAYYNSKDERLLLYRYAEKGNLFFRLHANRSGNRIPFPWNSRLSVAKGVARALTYLHLNAKPNNTDTLPPHGNLKSSNILLDQNDTVLVSDYGLTSLIAQPIASQRMVVYKSPEYTHTKKVSKHSDVWSYGSLLIELLTGRLSICSAPPGINGSDLCSWVHRAVREEWTAEIFDKEISAQRTALPGMLRLLQIAMRCTERYPENRPDMREVVREVEKIEVVPWMTTNTSEDEEDVSGDRSITTDDSMYSTSTTTSGIVGDDR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1828 657 SUPERFAMILY L domain-like 39 210 - -
Mibi03g1828 657 Gene3D Ribonuclease Inhibitor 35 220 IPR032675 -
Mibi03g1828 657 MobiDBLite consensus disorder prediction 222 247 - -
Mibi03g1828 657 MobiDBLite consensus disorder prediction 621 657 - -
Mibi03g1828 657 SUPERFAMILY Protein kinase-like (PK-like) 340 617 IPR011009 -
Mibi03g1828 657 ProSiteProfiles Protein kinase domain profile. 336 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1828 657 SMART serkin_6 336 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1828 657 Pfam Protein tyrosine and serine/threonine kinase 340 609 IPR001245 GO:0004672|GO:0006468
Mibi03g1828 657 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 614 - -
Mibi03g1828 657 Gene3D Transferase(Phosphotransferase) domain 1 413 636 - -
Mibi03g1828 657 Gene3D Phosphorylase Kinase; domain 1 301 411 - -
Mibi03g1828 657 MobiDBLite consensus disorder prediction 636 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1828 Mibi-ChrMibi03 52365865 52368722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1828 54 636 Receptor kinase-like Gene Family AT5G58300 35.610 1.14e-101 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi03g1828 PK_Tyr_Ser-Thr 1.5e-28 CL0016