Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1820 ATGACATGTCTTTTTCATCCATCCATAGCTCAAAGTTTAAGGCAGCTTGAAACTTTGAAGATAATCACATGTTCTAAGTTGAAATACATAATAGGGGATGAGGGATCGTCGATGGAAATCAAAGTGAATGATGAGGATTCGAAACCAAGGTGTCATGACTCAATGTTTCCAAAATTGAAACTCCTCCTTGTTGAAGGGTGTAAAGAGTTGGAGTCTGTATTGCCAATTTCTTTTTGTGAAGACCTTCCACTACTAGAAAGTGTGGAGATTTCTCAGTGCAGGAATTTAAGATACATGTTTGGGCAATATTATCCAGAAGAGGGAGGGTTGCATGAAATGCAAAAAGAAACTACACTTCATTTGTTGAAAGTAATTTCTATCAAAGATGTCCCATTACTTGGCAACATATATCCAGAATGTTTTCTCCTTCAGAAATCAACAGCAAATACTACAAACAAAGATGAGCCATCTAGTTCCAAGGAAGCTGATCAGCCGGACCACACTTCTTCACGGGAGAAATATGTTGGCAATATAGCTCGTGGAATTTTCACAACACCGTTATACCCTTGCAATTTGAGAGAGATGAATATTGGACATATTTCAAACTTAAGTTCATCACTGTTCTCTGTTTCCATTGCCTCATCAATGTTATTGTTAGAACGATTGCTAATGGGGATGCACCTGAGCAATTTGAACCACCTTAGTTTACTATCCTTGGACATGGTAACAATTTATGATCTTGAAAGACTTGAAACTGCAAGTCCACTGAATTCATGTTTGGAGTCGTTGGCATTTGGACACTTGGATAAGTTAACAAACATATGTGTTGGACCCAAAAATGTTCAGCTCAGCTTTCCAAATCTTTCCAAGCTATGGATCAATAAGTGCCATCAACTGAAATTTATCTTGTCTGCATCTATGTCGAGAAGCCTACCTAGTTTGAGACAACTATGGGTATTTGAATGTGAAGAGCTAGAGCGCATCATTGAGGAGGAGGAGGATGAAGAAGAAGAATATTGGTTCCCAAATCTCCATACAATTTTTGTGGAAGACTGCGATAGCTTGAAATGTCTATTCTCCATCTCCACATGTGGGAAGCTTTCACAGCTCATGATGTTGCATATATCAAGTGCCCCAGAGCTAGAGCAAGTATTTGAATGGAAGCAGGGAGCAACGCAAGATCAAGAGTTGGGCATCAAGGATGTGTTCCCCAAGCTATTTGTGATAAACCTTGAAGATCTCCCAAGACTTCATACTATTTGCCCTGCAATTGATTTCCGTACCGTGATATGCTGTACTGTACAGGATTGTCCCAACATCTCTTTAACTTCAACTGATAATGAGTTCCTTTCCAGTTATTTCGCCTGGTTACAAAAATCTGAGAGTAAGAAGGAATTCTTCGATAAACTTGATCTTCATGAACAGCATATTAATGTAAGTTCCAAAAAGTATGAACTTCCTGATGTACAAAGAAACAGAGGTGAGAACAGGACTCCATTCACATGGAAGTCAAGATTATCAGTGGCGAAAGGGGTGGCAAGAGCATTAACTTACCTTCATGTCAATGCCAAATGTAACACCACCACCGTGGCTCCCCATGGAAACTTGAAGTCCTCAAATGTCTTGTTCGATGAAAACGACACCGTTTTAGTCTCTGACTTCAGACTTTCCTCCCTCATAGAACAATCCATGGAAGTTCAAAGCATGGTCGTTTACAAGTCACCAGAATACGATGACGCCAAAAAAGTATCAAACAAATCTGATGTTTGGAGCTATGGAAGCCTTCTCTTGGAACTTTTAACAGGAAAGTTATCAACTTTATCAGCCCCACATGATGTGACTGGATCAGATCTTTGTAGTTGGATCCACGGAACAGAGAGGGAAGAATGGACTGTGGAGATATTTGATAAGGAAATTTCTGTACGGGGAAATGAACTTTTTGGGATGATAAGATTGCTTCAGATTGCCAGGGATTGCACTCATAGGTACCCTGAGAAACGGCCAGATATGAGGGAGGTGTGGAGAGAAGTGGAGAAGATTGAGGAGGTGGATGATGAAGATGAAGATGATGTACATGAGAAGACTATAACGAGGGATCCACCAACAGTCCAACAAAGCAATGCTTCATCAAGTGTAATTAAGAAAATAGCAGAGGCAAGTAATGGTGAAAGTCCAGGAGCAGAAGACGCTATGGGAGAATCTAATGAAGCAAGTCCAGAATCAGAGGAAGCTGGTGAAGTCAAGGATTCAGAGCAAACCAACAAACCTGCACCATTTGCCACTCCTTCACAAATTGAGTCTCCACTAGTAAGATTGCCATATTTTCCAATTTAA 2334 0.4027 MTCLFHPSIAQSLRQLETLKIITCSKLKYIIGDEGSSMEIKVNDEDSKPRCHDSMFPKLKLLLVEGCKELESVLPISFCEDLPLLESVEISQCRNLRYMFGQYYPEEGGLHEMQKETTLHLLKVISIKDVPLLGNIYPECFLLQKSTANTTNKDEPSSSKEADQPDHTSSREKYVGNIARGIFTTPLYPCNLREMNIGHISNLSSSLFSVSIASSMLLLERLLMGMHLSNLNHLSLLSLDMVTIYDLERLETASPLNSCLESLAFGHLDKLTNICVGPKNVQLSFPNLSKLWINKCHQLKFILSASMSRSLPSLRQLWVFECEELERIIEEEEDEEEEYWFPNLHTIFVEDCDSLKCLFSISTCGKLSQLMMLHISSAPELEQVFEWKQGATQDQELGIKDVFPKLFVINLEDLPRLHTICPAIDFRTVICCTVQDCPNISLTSTDNEFLSSYFAWLQKSESKKEFFDKLDLHEQHINVSSKKYELPDVQRNRGENRTPFTWKSRLSVAKGVARALTYLHVNAKCNTTTVAPHGNLKSSNVLFDENDTVLVSDFRLSSLIEQSMEVQSMVVYKSPEYDDAKKVSNKSDVWSYGSLLLELLTGKLSTLSAPHDVTGSDLCSWIHGTEREEWTVEIFDKEISVRGNELFGMIRLLQIARDCTHRYPEKRPDMREVWREVEKIEEVDDEDEDDVHEKTITRDPPTVQQSNASSSVIKKIAEASNGESPGAEDAMGESNEASPESEEAGEVKDSEQTNKPAPFATPSQIESPLVRLPYFPI 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1820 777 MobiDBLite consensus disorder prediction 681 777 - -
Mibi03g1820 777 MobiDBLite consensus disorder prediction 156 170 - -
Mibi03g1820 777 MobiDBLite consensus disorder prediction 148 170 - -
Mibi03g1820 777 MobiDBLite consensus disorder prediction 698 717 - -
Mibi03g1820 777 Pfam Protein tyrosine and serine/threonine kinase 496 675 IPR001245 GO:0004672|GO:0006468
Mibi03g1820 777 Gene3D Transferase(Phosphotransferase) domain 1 485 702 - -
Mibi03g1820 777 SUPERFAMILY L domain-like 192 427 - -
Mibi03g1820 777 Coils Coil 315 335 - -
Mibi03g1820 777 ProSiteProfiles Protein kinase domain profile. 370 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1820 777 SUPERFAMILY Protein kinase-like (PK-like) 485 683 IPR011009 -
Mibi03g1820 777 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 494 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1820 Mibi-ChrMibi03 52139461 52144730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1820 492 688 Receptor kinase-like Gene Family AT1G48480 38.693 3.33e-36 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi03g1820 PK_Tyr_Ser-Thr 2.1e-16 CL0016