Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1808 ATGGCGCTTTCAATTTCAACTCTGAACCATTTCTCATCCACACGCTTCCCTTCCCACTTCACCATTCTCCTCTCTTCTTCTTCCTCTTCCTCTCTTGTTACCTTCTCGCCGAAGAGATTGTCTGTGCCGGCCATTCCAAAACGCCTTCGTTTCCAACGCATTTCTGCCTCTGGGGATGACAATTCCCAATCTGGTCAACTTCCGTCCCTATCACCTGAAGTTCTTGTTCTCAATGTTGAGGGTATGATGTGTGAGGGATGTGCAGATAGTGTGAAGAAACTTCTAGAGAGTCTGCCTCAAGTTTCATCTGCTAGTGTAAATCTAACAGAAAAAGTAGCAACAGTTTGGCCAGTACCTGAAGCAAAAAATGAATCAAATTGGCATAACAAATTGGGTGGTGGACTTGCAGAGCATTTAACCAACTGTGGCTTCAAATCTAGCCTTCAAGGTCAGAAAGATAGTAACTGA 468 0.4423 MALSISTLNHFSSTRFPSHFTILLSSSSSSSLVTFSPKRLSVPAIPKRLRFQRISASGDDNSQSGQLPSLSPEVLVLNVEGMMCEGCADSVKKLLESLPQVSSASVNLTEKVATVWPVPEAKNESNWHNKLGGGLAEHLTNCGFKSSLQGQKDSN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1808 155 SUPERFAMILY HMA, heavy metal-associated domain 74 125 IPR036163 GO:0046872
Mibi03g1808 155 ProSiteProfiles Heavy-metal-associated domain profile. 74 148 IPR006121 GO:0046872
Mibi03g1808 155 ProSitePatterns Heavy-metal-associated domain. 79 108 IPR017969 GO:0046872
Mibi03g1808 155 FunFam Copper-transporting ATPase PAA1, chloroplastic 73 148 - -
Mibi03g1808 155 Gene3D - 74 152 - -
Mibi03g1808 155 CDD HMA 76 147 IPR006121 GO:0046872
Mibi03g1808 155 Pfam Heavy-metal-associated domain 76 123 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1808 Mibi-ChrMibi03 51824382 51826228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1808 71 147 Primary Pumps ATPases AT4G33520 61.039 1.46e-28 103