Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1778 ATGGCTTCCCTTCATCCTCCTTATCCATCTGGAGCTTATGATTATGAAGCTAGGCACAGCTTTGGAGCTAGTGGAAGAGGGCTAGAGATTGAAACGACGACGTTAGATGTGGAAGAAACAATAACAGGGAAGAAGAAGAAGAGTGATGATATTATTGATGGAGAAGGGATATGGCTGACGTGGAAGGACGTGTGGGTGACAGCTTCAACTTCAAATGGGAAGAAGCAGAAAGGGAATGATAATATTAATGGAAATGGAAGCAGAAGAACAATCCTTGAAGGTCTCACTGGTTATGCAAAACCGGGCCAGCTTCTCGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATACTCTAGCAGGGAGATTAGGTTCAAACACAAGGCAAGCAGGGGAAATTCTTATTAATGGCCACAAACAAGCTCTTGCTTATGGGACATCAGCATATGTGACACAAGATGACACATTGCTCACAACCCTAACAGTTGGAGAAGCAGTGTACTATTCTGCTCAGCTTCAACTACCAGACACAATGTCAAAGGAAGAGAAAAAGGAGAGAGCAGAGTTCACAATAAGAGAAATGGGCCTGCAAGACGCCATTAACACAAGAATTGGAGGTTGGGGTTGTAAGGGAATCAGTGGAGGCCAAAAGAGAAGAGTGAGTATTTGCATAGAGATCCTGACACGTCCAAGACTTTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCAGCCTCGTACTATGTCATGAGCAGAATCGCCAGCCTTGATCAAAAAGATGGGATTCAAAGGACCATTATTGCTTCCATTCATCAGCCTAGTACTGAAGTGTTTCAACTCTTTGATAATCTATGTCTTCTTTCTTCTGGAAGAACTGTGTTCTTTGGTCCTACTTCCACAACAAGTGAGTTCTTTACGTCAAATGGCTTTCCTTGTCCAGCTCTCCAAAATCCATCTGATCATTTCTTGAAAACTATAAACAAGGATTTTGATGATAATCAGGACATTGAAGTGGGCTTAGCTGGCACTCAAAGGAAGCATACAGAAGAAGCAATAGAAATGCTTGTCACATCATATAAGTCTTCTGATCTGAACCAACAAGTTCAAGCAGAAGTAGCATCACTATCTGCTCAGGAAAGTGGAATGGTGGAGAAAAAGAAGATGAAGAAAAGAGAGCATGCAAGCTTCCATACTCAATGCATTGTTCTTACAAAGAGATCATTTGTGAACATGCGTCGTGATGTAGGCTATTACTGGCTACGCCTTGCCATATACATTGCTTTGGCAGTAGCTTTGGGCACTGTGTTCTATGATTTGGGCATGAGCAAGGGGTCTATTCAGGATAGAGGTGCACTTCTTGCGTTTGTGTCTTCCTTCATAACTTTCATGACCATTGGTGGATTCCCTTCGTTTGTGGAAGATATGAAGGTATTTCAAAGGGAAAGGCTGAATGGGCACTATGGAGTAACGGCCTACGTGATAGGAAATAGCTTATCTTCAATCCCATACTTATTACTCGTCTCTTTCATCCCTGGAGCCATAGTCTATTTCCTCCCAGGCCTTCAAAAATCCGTTGAAAACTTCATCTTCTTTTGCAGCATCCTCTTTTCATGTTTGATGCTAGTTGAAAGTCTCATGATGATAGTGGCTAGCATTGTCCCTAACTTCCTCATGGGAATCATAACTGGCGCTGGACTTCAAGGCATCATGATGCTAGCTGGAGGCTTCTTCAAATTGCCCCATGACCTTCCTAGAATCTTCTGGAAGTATCCTCTCTACTACATCGCCTTCCATAGATACGCCTACGAAGGAATGTTCAAGAATGAGTTCGAAGGACTTAGGATTGGTGGTAAAAGTGGGGATGAGATTCTAAGAGGCATATGGCAAGTTAATATGAGTTATTCTAAGTGGTTTGATCTTGCCATTCTTCTAGGGATGGTTGTTGTGTATAGAGTAGCGTTCTTGGTGATCATTAAGGGCACTGAGAAGATGAAGCCTTTGATTGCTTCTTTGTTCTCTGGCCCTCCTAGGAGAAGCATTCAAGTTATGGCCAATCCAAATGCTACCCCCTTACATGAATGA 2094 0.4279 MASLHPPYPSGAYDYEARHSFGASGRGLEIETTTLDVEETITGKKKKSDDIIDGEGIWLTWKDVWVTASTSNGKKQKGNDNINGNGSRRTILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQAGEILINGHKQALAYGTSAYVTQDDTLLTTLTVGEAVYYSAQLQLPDTMSKEEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDQKDGIQRTIIASIHQPSTEVFQLFDNLCLLSSGRTVFFGPTSTTSEFFTSNGFPCPALQNPSDHFLKTINKDFDDNQDIEVGLAGTQRKHTEEAIEMLVTSYKSSDLNQQVQAEVASLSAQESGMVEKKKMKKREHASFHTQCIVLTKRSFVNMRRDVGYYWLRLAIYIALAVALGTVFYDLGMSKGSIQDRGALLAFVSSFITFMTIGGFPSFVEDMKVFQRERLNGHYGVTAYVIGNSLSSIPYLLLVSFIPGAIVYFLPGLQKSVENFIFFCSILFSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMMLAGGFFKLPHDLPRIFWKYPLYYIAFHRYAYEGMFKNEFEGLRIGGKSGDEILRGIWQVNMSYSKWFDLAILLGMVVVYRVAFLVIIKGTEKMKPLIASLFSGPPRRSIQVMANPNATPLHE 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1778 697 ProSitePatterns ABC transporters family signature. 215 229 IPR017871 GO:0005524|GO:0016887
Mibi03g1778 697 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 54 675 - -
Mibi03g1778 697 FunFam ABC transporter G family member 11 57 362 - -
Mibi03g1778 697 Pfam ABC transporter 94 243 IPR003439 GO:0005524
Mibi03g1778 697 Pfam ABC-2 type transporter 402 614 IPR013525 GO:0016020|GO:0140359
Mibi03g1778 697 SMART AAA_5 101 295 IPR003593 -
Mibi03g1778 697 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 318 IPR003439 GO:0005524
Mibi03g1778 697 Gene3D - 80 311 IPR027417 -
Mibi03g1778 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 307 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1778 Mibi-ChrMibi03 50938300 50944251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1778 91 310 Calmodulin-binding Proteins AT2G36910 29.075 2.13e-09 59.3