Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1777 ATGCGACCTTCATCTTACACACTTGGGGGAAGAAGAACTAGTAAGAACTATGAGGCTGATTTTAATGAAGGGTCAAGAGAGGCCACTGATGTTTCTCAAGTACGACAGAGATGGAGATCTTCTTTCTCTTGTGCTAAGGATCACAACCCCACTGTCTTGTTTGCCGACAATGCTGAACGCTTGGGCACTTATCGTGGACACAATGGTATTGTGATGTCTCAACTTGTAACAGGAAGTCCGGATCAGACGTTGAAACTATGGAATGTTCAAACCGGGAAGCAGTTTTTCACATTCAACTTTGATTCTCCTTCTAGGTCTGTGGATTTCGCTGCGGGCGACAAACTTGCTGTTATTACAACTGATCCCTTGATGGAATAG 378 0.4418 MRPSSYTLGGRRTSKNYEADFNEGSREATDVSQVRQRWRSSFSCAKDHNPTVLFADNAERLGTYRGHNGIVMSQLVTGSPDQTLKLWNVQTGKQFFTFNFDSPSRSVDFAAGDKLAVITTDPLME 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1777 125 ProSiteProfiles Trp-Asp (WD) repeats profile. 75 97 IPR001680 GO:0005515
Mibi03g1777 125 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 31 119 - -
Mibi03g1777 125 MobiDBLite consensus disorder prediction 1 32 - -
Mibi03g1777 125 MobiDBLite consensus disorder prediction 16 32 - -
Mibi03g1777 125 Gene3D - 30 125 IPR015943 GO:0005515
Mibi03g1777 125 SUPERFAMILY WD40 repeat-like 42 121 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1777 Mibi-ChrMibi03 50870053 50870548 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1777 42 125 Eukaryotic Initiation Factors Gene Family AT2G46280 64.130 9.06e-38 126