Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1754 ATGGGGCTCCATCACAGGAAGATTCTCGAAGAAATATGCTACCTTTACTGCAACTTGAAAGATTCCTCTTCATGTTCTTCCTCTGACTGTAATGGCTGCAAAATCCACTGCACCTTCGCCGGACCTCCGATTTTCTACACCCCACCTTCTCCTTCCTTCGAAGACTATGCCGATTTCCCAGATCCCAACAAAACCCACCACAAGATCATCGCCACGTGGCTCACCGTCGTCATCGCCATCCTCTCCGCCGCCTTCTTCTTCCTCCTCTGCTTCGCCCTCTACCGCAGGTTCCTCTTCAGAAGAAGGAGAAATAATAATTCGTCTGAAGAAGAAGAAGAAGAAGAGAATCGCAGGGGAGATTTTCTCGATGAGGAACATGGCCCTACGGTGGACCATCCCATATGGTATATTCGAACCCCTGGTTTACAACAATCCATAATTTCTGCTATTACTGTTTGTAGATATAAGAAAGGGGAAGGGTTGATTGATGGGACTGAGTGTTCTGTTTGTTTGAGTGAATTTGAGGATGATGAGAATCTCAGGCTTTTGCCTAAATGTAACCATGCTTTCCATTTGCCTTGTATTGATACATGGCTTCGTTCTCACACTAATTGCCCCTTGTGTCGTGCTCCGATTGTCGCGAATCCGGATACGGTTATCGCCTCGCCGGAGCCGAATTTCGCTGCTTTGAATGATTCTGAGGAACCCCAGATGGAAGCAATTGGAAATGGAGGTGATAATAATGGTGGGGTTGTTGAGATTAGTGATGGTGAATTGAGAAATAGAGATGAGGAAGAAGGAGGAGGAGGAAGAAGAGGAATTGTGGGTGAAGAGGAAGGAGTGGGGAATTTGCAGCCAAGGAGAAGATCTGTGTCTTTGGATTCTTCAGCTGCGGAGAAGATCAATAGAGCTCTAGCTAGAAGTGTAGTAGGATCATCTTCTTCTTCATCATCATCATCAAAGAGGGTATCCAAAAGTGGATCTTCTTCTTTCAGGATGAAGTCTCTTCAGATTGTTGCAGGAACTTCAATGAAGAGATCTCGTTCACATTCTTGGTATAGTCGAAGTCAGAGGAAGCCAAGTGTTCCTATCAGAAGCTTTTGA 1104 0.4547 MGLHHRKILEEICYLYCNLKDSSSCSSSDCNGCKIHCTFAGPPIFYTPPSPSFEDYADFPDPNKTHHKIIATWLTVVIAILSAAFFFLLCFALYRRFLFRRRRNNNSSEEEEEEENRRGDFLDEEHGPTVDHPIWYIRTPGLQQSIISAITVCRYKKGEGLIDGTECSVCLSEFEDDENLRLLPKCNHAFHLPCIDTWLRSHTNCPLCRAPIVANPDTVIASPEPNFAALNDSEEPQMEAIGNGGDNNGGVVEISDGELRNRDEEEGGGGRRGIVGEEEGVGNLQPRRRSVSLDSSAAEKINRALARSVVGSSSSSSSSSKRVSKSGSSSFRMKSLQIVAGTSMKRSRSHSWYSRSQRKPSVPIRSF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1754 367 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 216 IPR013083 -
Mibi03g1754 367 MobiDBLite consensus disorder prediction 256 273 - -
Mibi03g1754 367 MobiDBLite consensus disorder prediction 307 367 - -
Mibi03g1754 367 MobiDBLite consensus disorder prediction 105 126 - -
Mibi03g1754 367 ProSiteProfiles Zinc finger RING-type profile. 167 209 IPR001841 -
Mibi03g1754 367 SMART ring_2 167 208 IPR001841 -
Mibi03g1754 367 FunFam RING-H2 finger protein ATL54 142 215 - -
Mibi03g1754 367 MobiDBLite consensus disorder prediction 241 295 - -
Mibi03g1754 367 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 63 216 IPR044675 -
Mibi03g1754 367 CDD RING-H2_PA-TM-RING 166 209 - -
Mibi03g1754 367 Pfam Ring finger domain 166 209 IPR001841 -
Mibi03g1754 367 SUPERFAMILY RING/U-box 161 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1754 Mibi-ChrMibi03 50583415 50584518 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1754 70 262 C3H Transcription Factor Family AT1G72220 47.179 4.73e-49 168