Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1708 ATGGAGAACATAGCAGCGAGACAAGTGGCTTTCTCGAAGAGAAGAACAGGTCTCTTCAGGAAGGCTATGGAGTTTTCTACTCTTTGTGATGCTGAGATTGCTCTCTTTGTTCTTTCAGCTTGTGGCAAACTCTTTGATTACGATAGTACCAGAGGAAAAGAAATAATGCTGATCCATATTTGCTTATCAAGAAGTTGCGATAGCCTCTACATATGCCTTGGTTGTGGGGACTTACCCAATCATAGCACTCTTTATTATATAGCTTTGTAG 270 0.4074 MENIAARQVAFSKRRTGLFRKAMEFSTLCDAEIALFVLSACGKLFDYDSTRGKEIMLIHICLSRSCDSLYICLGCGDLPNHSTLYYIAL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1708 89 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 2 47 IPR002100 GO:0003677|GO:0046983
Mibi03g1708 89 PRINTS MADS domain signature 13 28 IPR002100 GO:0003677|GO:0046983
Mibi03g1708 89 PRINTS MADS domain signature 28 49 IPR002100 GO:0003677|GO:0046983
Mibi03g1708 89 SUPERFAMILY SRF-like 2 57 IPR036879 GO:0003677|GO:0046983
Mibi03g1708 89 ProSiteProfiles MADS-box domain profile. 1 51 IPR002100 GO:0003677|GO:0046983
Mibi03g1708 89 SMART madsneu2 1 50 IPR002100 GO:0003677|GO:0046983
Mibi03g1708 89 PANTHER SERUM RESPONSE FACTOR HOMOLOG 2 53 - -
Mibi03g1708 89 Gene3D - 3 66 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1708 Mibi-ChrMibi03 49379481 49380383 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1708 1 56 MADS-box Gene Family AT4G24540 57.143 2.00e-18 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mibi03g1708 SRF-TF 3.5e-19 No_clan