Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1695 ATGGATATGGCATTTGTGACTAATTTGGGGACAATACAGACACTTCTGAGTGGCCCAAAGAATGTTAACAAACCCACCAAAAAGTGGCATTCTGCTTTTGTTACTATATATTGTTACAGAACCCTCTTGTCTCACTTCAAATCCCCTTCACTTCCCACCACAATCATCAAAAAGAACAGTAAGCCTAAAAAGATATCACCTTCTTCCTCCTACTCTGTCATTGATATAGACACAGATCATTCTTTTTCTGTTTCCCAAACCACCCTCACGAATCTCGTGAAGGAGAAAAATGTAGAATCCCTGCAAAATCTTGGTGGGGTCCATGGGGTGGCCTCTGCTCTTAAAACCAAAATTGAAATTGGAGTCAAAGCCGGTGGTGAAGAAGACGGCGACAATGACGACAATTTCAGTGACGTCATAAGGCGGCGCAACGCGTTTGGTTCAAACACATACCCAAAACCACCTACCAGAGGTTTCTTTCACTTTGTCATTGAAGGATTCAAGGACCCCACCATTCTGATTCTCTTAATATGTGCTGCTCTGTCTCTTGGCTTTGGCATTAAGGAGAATGGAATTAAAGAAGGATGGTATGAAGGTGGAAGCATATTTGTTGCTGTTGTTCTTGTCATTGCTGTCTCTTCCATTAGTAATTTCAGACAAAGCAGGCAATTCGACAAATTGTCACAGGTCAGCAACAACATTCAGGTGGATGTGGTTCGAGGTGGTCGCAGGCGACATGTTTCTATATATGACATAGTTGTTGGTGATGTTGTGTGGCTGAAGATTGGAGACCAAGTTCCTGCTGATGGATTGTTCTTGGAAGGACATTCTCTTCAAGTTGATGAGTCAAGCATGACAGGTGAGAGTGACCACGTTGAGATCAATGGTGACAAAAACCCATTCTTGTTTTCTGGGACTAAGGTTGCTGATGGGTTTGCCAGAATGATTGTTACTTCTGTTGGCATAAACACCACTTGGGGTCAAATGATGAGTACCATAAGTAGAGATAATAATGAACAAACTCCTCTGCAACAACGTCTCAATAGGCTTACTTCTGCTATTGGAAAGGTTGGTCTGGCTGTGGCTTTTCTTGTTCTTCTTGTTATGTTGGTTCGCTACTTCACTGGGAACACAAGGGATGAGAATGGGAATAAAGAGTACAATGGAAGTAGAACAAAGGTTAATGGCATCATGAATGGAGTTGTGCACATTGTTTCTGCTGCAGTTACTATTGTTGTGGTTGCCATCCCAGAGGGGCTTCCTCTGGCCGTGACTTTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGATATGGCTATGGTGAGGAAGCTCTCTGCCTGTGAGACTATGGGGTCTGCTACAACCATTTGCACTGATAAGACTGGAACACTCACGCTTAATCAGATGAAAGTGACTAAATTTTGGCTTGGACAACAACCTATGGAAAAGAAGGCTTATGAATATTCATCAGTTCATTCATATGCTATTCAACTGATCAAAGAAGGGGTTGCACTTAACACTACAGGTAGTGTTTTCAAATCTAAATCTTTAGATTTTGGATATGAGTTTTCAGGTAGCGCCACAGAAAAGGCCATTCTTTCATGGGCTGTTCTTGATTTGGACATGCACATGGAGGAGTTGACTCAAAGTTGTACCACCATTCATGTGGAAGCCTTCAATTCAAAGAAGAAGAGAAGTGGGGTTTTGATTAGAAGGAAAGCAGACAATAAAATCCATGCACATTGGAAAGGAGCAGCTGAGATGGTATTGAGACAATGTTCAAAGTACTATGATGCTTCTGGTAATGTACAAGATCTTGACGATGCCAAAAGGTTGGTGATTGAGCGTATCATTGAAGGAATGGCAGCCAACAGCCTCAGGTGTATTGCTTTTGCACATGTAGAAGTAACAGAAGAAGATTTAAAAGAAGAAGGGCTCACCCTTTTAGGATTTGTTGGTATTAAAGATCCATGCCGTCTAGGTGTAAAGAAAGCTGTACATGATTGCCAAAAAGCAGGAGTAAGTGTCAAAATGATCACAGGAGACAACATTTTCACAGCCAAAGCCATAGCAACAGAATGTGGCATCCTCCCTCCTAATCAAGACACAACAGAAGCAGTCATTGAAGGAGAGGCATTTCGAAACTTGTCTGATGAGGAAAGACTGAAGAGAGTGGAGAAAATTTGTGTGATGGCACGATCCTCTCCCTTTGACAAGCTCTTGATGGTTCAATGCCTCAAACAGAAAGGGCATGTAGTTGCAGTCACAGGAGATGGCACCAATGATGCACCAGCATTAAAGGAAGCTGATATTGGACTTTCCATGGGGATTCAAGGCACTGAGGTTGCAAAAGAAAGCTCAGATATAGTCATCTTGGATGATAATTTTGCCTCAGTTGCCACGGTTCTAAAGTGGGGAAGATGTGTCTACAACAACATTCAAAAGTTCATTCAGTTTCAACTAACAGTGAATGTTGCAGCACTTGCAATTAACTTTGTCGCCGCAGTATCAGAAGGAAAAGTGCCATTAACAGCAGTTCAACTACTATGGGTGAACCTAATAATGGACACTTTGGGTGCTTTAGCTCTTGCAACAGAGAAGCCTACAATGGAGTTGTTGGACAAACCACCGGTTGGTAGAACTGAGCCTCTCATCACCAACATCATGTGGAGAAATCTCCTATCCCAAGCATTATACCAGATCACAATTTTGTTGACCTTACAGTTCAAGGGTAAAGAAATATTTGGTGTGAGTTCAAAGGTAAACGACACTTTGATTTTCAATACATTTGTGTTATGCCAAGTGTTCAATGAGTTCAATGCAAGGCAGCTGGAGAAGAAAAATGTGTTTCAGGGAATTCACAAGAACAAGTTGTTCATGGGGATCATAGGAATGACCATTATTCTTCAGGTGCTGATGGTAGAGTTTCTGAAGAAATTTGCAAATACAGAGAGGCTGAATTGGGGGCAGTGGGGTTCATGCATTTTAATGGCTGCTATTTCTTGGCCTATTGGTTGGGTTGTCAAGTTTATTCCTGTTACAGAGAGACCGTTGCTTAGTTTCTTGAACAGGAGGCAACAATGA 3087 0.4192 MDMAFVTNLGTIQTLLSGPKNVNKPTKKWHSAFVTIYCYRTLLSHFKSPSLPTTIIKKNSKPKKISPSSSYSVIDIDTDHSFSVSQTTLTNLVKEKNVESLQNLGGVHGVASALKTKIEIGVKAGGEEDGDNDDNFSDVIRRRNAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLICAALSLGFGIKENGIKEGWYEGGSIFVAVVLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRGGRRRHVSIYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDKNPFLFSGTKVADGFARMIVTSVGINTTWGQMMSTISRDNNEQTPLQQRLNRLTSAIGKVGLAVAFLVLLVMLVRYFTGNTRDENGNKEYNGSRTKVNGIMNGVVHIVSAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQQPMEKKAYEYSSVHSYAIQLIKEGVALNTTGSVFKSKSLDFGYEFSGSATEKAILSWAVLDLDMHMEELTQSCTTIHVEAFNSKKKRSGVLIRRKADNKIHAHWKGAAEMVLRQCSKYYDASGNVQDLDDAKRLVIERIIEGMAANSLRCIAFAHVEVTEEDLKEEGLTLLGFVGIKDPCRLGVKKAVHDCQKAGVSVKMITGDNIFTAKAIATECGILPPNQDTTEAVIEGEAFRNLSDEERLKRVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSEGKVPLTAVQLLWVNLIMDTLGALALATEKPTMELLDKPPVGRTEPLITNIMWRNLLSQALYQITILLTLQFKGKEIFGVSSKVNDTLIFNTFVLCQVFNEFNARQLEKKNVFQGIHKNKLFMGIIGMTIILQVLMVEFLKKFANTERLNWGQWGSCILMAAISWPIGWVVKFIPVTERPLLSFLNRRQQ 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1695 1028 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 464 663 IPR023299 GO:0000166
Mibi03g1695 1028 Gene3D - 468 658 IPR023299 GO:0000166
Mibi03g1695 1028 SFLD C1.7: P-type atpase like 440 810 - -
Mibi03g1695 1028 PANTHER CATION TRANSPORTING ATPASE 70 1014 - -
Mibi03g1695 1028 FunFam Calcium-transporting ATPase 653 802 - -
Mibi03g1695 1028 Gene3D - 165 1012 - -
Mibi03g1695 1028 Gene3D - 455 802 IPR023214 -
Mibi03g1695 1028 Pfam haloacid dehalogenase-like hydrolase 455 771 - -
Mibi03g1695 1028 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Mibi03g1695 1028 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Mibi03g1695 1028 PRINTS P-type cation-transporting ATPase superfamily signature 458 472 - -
Mibi03g1695 1028 PRINTS P-type cation-transporting ATPase superfamily signature 757 776 - -
Mibi03g1695 1028 PRINTS P-type cation-transporting ATPase superfamily signature 781 793 - -
Mibi03g1695 1028 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Mibi03g1695 1028 PRINTS H+-transporting ATPase (proton pump) signature 615 633 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi03g1695 1028 PRINTS H+-transporting ATPase (proton pump) signature 757 773 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi03g1695 1028 PRINTS H+-transporting ATPase (proton pump) signature 789 814 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi03g1695 1028 FunFam Calcium-transporting ATPase 210 334 - -
Mibi03g1695 1028 SUPERFAMILY Calcium ATPase, transmembrane domain M 108 1014 IPR023298 -
Mibi03g1695 1028 Pfam Cation transporting ATPase, C-terminus 842 1012 IPR006068 -
Mibi03g1695 1028 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 80 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi03g1695 1028 FunFam Calcium-transporting ATPase 774 1016 - -
Mibi03g1695 1028 Gene3D - 139 334 - -
Mibi03g1695 1028 SMART Cation_ATPase_N_a_2 103 187 IPR004014 -
Mibi03g1695 1028 CDD P-type_ATPase_Ca_PMCA-like 141 890 - -
Mibi03g1695 1028 FunFam Calcium-transporting ATPase 468 658 - -
Mibi03g1695 1028 SUPERFAMILY HAD-like 456 862 IPR036412 -
Mibi03g1695 1028 Pfam Cation transporter/ATPase, N-terminus 137 182 IPR004014 -
Mibi03g1695 1028 Pfam E1-E2 ATPase 235 436 - -
Mibi03g1695 1028 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 729 838 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi03g1695 1028 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 399 492 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi03g1695 1028 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 202 375 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi03g1695 1028 SUPERFAMILY Calcium ATPase, transduction domain A 233 332 IPR008250 -
Mibi03g1695 1028 SFLD p-type atpase 440 810 IPR044492 -
Mibi03g1695 1028 ProSitePatterns E1-E2 ATPases phosphorylation site. 460 466 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1695 Mibi-ChrMibi03 48716250 48719336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1695 12 1028 Primary Pumps ATPases AT3G22910 67.415 0.0 1305