Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1683 ATGTGTGGTGAAATTCCACCATCTCTCTTCAACATTTCTTCTTTAAAATCTTTAGATTTAAAGAAAAACAATTTGAATGGTAGTCTTCCGAGATCAACGAGTAATAAGACTTTGTTGGAAGTATTAAGTCTCTCATGGAATTCCTTTTCAGGTGGAATCCCTTTATTTATTTGGAACATGCCTTCCTTGAGATCCGTTTACATTGGCAATAATCAATTAAAGGGTAGTTTGCCTAAAGAAATGTGCCATCAACTGCCTTTACTTGAAGCCTTCGATGTTGATTTTAATCAGTTGGATGGAAGCATTCCAGAATCAATAAGTAACTGCACATCTTTGAAAGAATTATATTTGGATGGTAACTCATTTACAGGTTTTATACCCAAGGATATAGGCAATCTTGTTAAACTTGAATTGATAGAGTTGGGATCAAACAATTTGAAAATTCTTACCAAAACGTTGGCTACAATTGGTTATATGGCACCAGAATATGGATTGGAAGGAGTTGTTTCTGCCAAAGGAGATGTGTATAGCTATGGTATTTTGTTAATGGAAATATTTACGAGGAAGAAGCCAACAGATGATATGTTTGTTCAAGGATTAAATTTGAAAGAGTGGGTAAACAAATCGACACCACATTCAATCATCAATATTATAGATGTCAATTTGTTGCGGAGAGAAAATCAAAGTACTAATGATATATTACCTCATATATCATCAATTTTTAAGTTAGCATTAAATTGTTGTACTGATATACCTGAGGCACGACTTACCATGATTGATGTTGTAGTGTCATTGAAAATAATCAAGGCTTCGCTTATGGAAAATGCTAGAGGCACTACTAGTTGA 846 0.3381 MCGEIPPSLFNISSLKSLDLKKNNLNGSLPRSTSNKTLLEVLSLSWNSFSGGIPLFIWNMPSLRSVYIGNNQLKGSLPKEMCHQLPLLEAFDVDFNQLDGSIPESISNCTSLKELYLDGNSFTGFIPKDIGNLVKLELIELGSNNLKILTKTLATIGYMAPEYGLEGVVSAKGDVYSYGILLMEIFTRKKPTDDMFVQGLNLKEWVNKSTPHSIINIIDVNLLRRENQSTNDILPHISSIFKLALNCCTDIPEARLTMIDVVVSLKIIKASLMENARGTTS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1683 281 Gene3D Transferase(Phosphotransferase) domain 1 132 279 - -
Mibi03g1683 281 Pfam Protein tyrosine and serine/threonine kinase 150 206 IPR001245 GO:0004672|GO:0006468
Mibi03g1683 281 SUPERFAMILY L domain-like 3 149 - -
Mibi03g1683 281 Pfam Leucine rich repeat 92 146 IPR001611 GO:0005515
Mibi03g1683 281 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 88 146 - -
Mibi03g1683 281 Gene3D Ribonuclease Inhibitor 1 105 IPR032675 -
Mibi03g1683 281 SUPERFAMILY Protein kinase-like (PK-like) 149 272 IPR011009 -
Mibi03g1683 281 Coils Coil 269 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1683 Mibi-ChrMibi03 47816449 47825104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1683 148 266 Receptor kinase-like Gene Family AT4G36180 31.933 5.83e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi03g1683 PK_Tyr_Ser-Thr 6e-08 CL0016