Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1678 ATGATGAACGAAGATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGTAAAGGAAACAAGCATGTGTCAAATAAAGTGATGCTGATGATAATGTGTTCATTGCCTGTCATGGTTGTCATTTTGGTTGTTTCAGGAATTATCTTTCTAAAGCGTAAGAGAGATGATGATAATTATTCAACTAAGAGGGATGTAATCAATTTGGATGCACCAACTAGGATATCCTATTATGAGCTTCTACAAGGAACAAATGGATTTAATGAGAGTAATCTTCTTGGGTCTGGAAGTTTTGGATCAGTATACAAAGCAATTCTTCCAAATGAAGAGATAGTTGCTGTCAAAGTATTTAACTTAGATATGGAAGAAGCATTCAGAAGTTTTGATATTGAATGTCTTGCCATGTGCAATTTACGCCATCGCAATATCATTAAGATAATTAGTAGTTGCTCAAATTATCATTTCAAATCTCTAATAATGGAATTCATGGACAATGGAAGTCTTGACAGATGGTTGTACTCTCATAACTATTATTTAAATGTTTTTCAAAGGATGAACATAATGATTGATGTGGCAACAGCTTTGGAGTATCTTCATCATGGTTCTTCTGTACTCTTTGTCCATTGTGATGTCAAACCAAGCAATGTATTATTAGACAAAGATATGGTGGCTCATCTTAGTGACTTTGGTATTTCAAAATTGTTTGGTGAAAGACAACTAGAAATTTACACCAAAACTTTGGCTACAATAGGCTATATCGCACCAGATTTGAATTGA 777 0.3411 MMNEDLCGKSQLQVQPCSKGNKHVSNKVMLMIMCSLPVMVVILVVSGIIFLKRKRDDDNYSTKRDVINLDAPTRISYYELLQGTNGFNESNLLGSGSFGSVYKAILPNEEIVAVKVFNLDMEEAFRSFDIECLAMCNLRHRNIIKIISSCSNYHFKSLIMEFMDNGSLDRWLYSHNYYLNVFQRMNIMIDVATALEYLHHGSSVLFVHCDVKPSNVLLDKDMVAHLSDFGISKLFGERQLEIYTKTLATIGYIAPDLN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1678 258 FunFam Os07g0541700 protein 163 250 - -
Mibi03g1678 258 SMART serkin_6 87 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1678 258 SUPERFAMILY Protein kinase-like (PK-like) 61 257 IPR011009 -
Mibi03g1678 258 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Mibi03g1678 258 ProSiteProfiles Protein kinase domain profile. 87 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1678 258 Pfam Protein kinase domain 88 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1678 258 Gene3D Phosphorylase Kinase; domain 1 49 162 - -
Mibi03g1678 258 PANTHER OS04G0122200 PROTEIN 2 256 - -
Mibi03g1678 258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mibi03g1678 258 FunFam Serine-threonine protein kinase plant-type 67 162 - -
Mibi03g1678 258 Gene3D Transferase(Phosphotransferase) domain 1 163 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1678 Mibi-ChrMibi03 46782920 46783813 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1678 3 256 Receptor kinase-like Gene Family AT3G47570 39.223 5.50e-55 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi03g1678 Pkinase 2.5e-35 CL0016