Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1671 ATGTGTGAAATCCCACCATCTCTCTTCAACATTTCATCTTTAAAAGCTTTAGATTTACAGAAAAACAATTTGAATGGAAGTCTTCCGATATCAATGAGTAATGAAACGTTGTTGGAAGGATTAATTTTATCATGGAATTACTTTACAGGTGAAATTCCTTCATTCATTTGGAACATGCCTTCTTTGAGATTTGTTGGCCTCTGCATGAATTATTTAAAGGGAAATTTGCCAAATGAAATGTGCCACCAACTCCCTTTACTTGAATTCTTTGATGTTAATGGTAATAAGTTAGACGGAAGCATTCCAGAATCAATAAGTAACTGCACATCTTTAAAAAAATTATATTTGGATTCTAATTCATTTACAGGTTTTATACCCAAGGATATAGGCAATCTCATTAAACTTGAAGTCTTAGATTTGGGATCAAACAATTTGAGTGGATCCATTCCTTCCAATATATTCAACATCTCAACATTGACACGTCTCTACCTTGGACATAATTCCTTCTTTGGCCATCTCCCATCATATTTAGGAATTGGCTTTCCCAAAATGAAGCAGTTATATCTGGATGAAAATGAACTAACTGGACAAATTCCAAACAGCATATCAAATGCTTCTAAGCTCATTCAGTTAGCTTTGTCATTGAATAAATTTAGCGGAGCTATACCAAATGAAATTGGAAGTCTAACAAACTTGATTGAATTGGCTTTGGATGGGAATGATTTGACTGGGCTGATTCCAGAGACAGTTAGAAAATTAAACAGACTTCAAAGTTTGAGTCTTAGCAATAACAGATTGCAAGGATCCATTATAAATGAATTTTGCCAACTCAAAAGTTTAAGTGAGTTGTATCTTGCCAATAACAAATTTTCTGGAGTGCTTCCAGAATGTCTAGGGAATACTTATTTGCAAAAGATGGATCTTAGCTCTAACAAATTGATTTCTCGTATACCTTCTTCTCTTTGGAATCTCAGAGATATTTTGTTTCTTGATATATCCTCCAATGCACTAAGTGGAAAAATTTCACCAGAGGTATCAAACTTGAGGGCAATTACATTATTGAACTTGTCAAGAAATCAAATTTCAGGAAGCATCCCAACAACCATGGGTGGCCTACAAACTTTGGTCACCTTATCTTTGGCTTACAACAAATTACAAGGGTCGATTCCTAAATCATTTAGTGGCATGATAAGCATGGAGTCCATGGATCTTTCACATAATTATTTATCCGGTGTGATTCCAAAGTCCTTAGAGTCATTACTCCATCTCAAATACATTAATCTTTCCTACAATTTATTGCATGGAGAAATTCCGAATGGAGGCCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATAAATAAAGATCTTTGTGGGAAATCTCAATTACAAGTCCAACCATGTAGTAAAGGAAACAAGCGCATGTCAAATAAAGTGATGCTGATTATAAAGTGTTCATTGCCTATCATGGTTGTCATTTTAGTTGTTTCAGGCATTGTTTTGCTAAAGCTTAAGAGAGATAATGATAATCATTCAACTAAGAGGGATTCAATCAATTTAGATACACCAATCAAGATATCCTATTATGAGCTTCTCCAAGGAACAAATGGTTTTGATGAGAGTAATCTTCTTGGATCTGGAAGTTTTGGGTCAATATACAAAGCAATTCTTTCAAATGAAGAGATATATGCTGTCAAAGTATTTAACTTAGACATGGAAGAAGCATTCAGAAGTTTTGATATTGAATGTGTTGCCATGTGCAATTTGCGCCATCGCAATATTATTAAGATAATTAGTAGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGACAATGGAAGTCTTGACAGATGGTTGTACTCTAACAACTACTACTTAGATGTTTTGCAAAGGATGAACATAATGATTGATGTTGCCTCAGCTTTGGAGTATCTTCATCATGGTTCTTCTATACTCTTTGTTCATTGTGATGTCAAACCAAGCAATGTGTTATTAGACAAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTTCAAAATTGTTTGGTGAAAGACAACTAGAAATTTACACCAAAACTTTGGCTACAATCGGCTATATGGCACCAGAACACGGATTGGAAGGAGTTGTTTCTGCCAAAGGAGATGTGTATAGCTATGGTATTTTGCTAATGGAAATATTTACAAGAAAGAAGCCAACAGATGAGATGTTTTTTCAAGGATTAAGTTTGAAAGAGTGGGTAAGTAAATCGACACCACATTCAATCATCAATATTATAGATGTCAATTTGCTGCAGAGAGAAAATGAAAAAAATTATGATGTATTACCTCATATGTCATCAGTTTTTGAATTAGCATTAAATTGTTGCATTGAGTTACCTGAGGCACGACTTACTATGATTGATGTTGTAGTGTCATTGAAAAAAATCTTGGCTTTGTTGATGGAAAATATTAGAGGCACTACTAGTTGA 2481 0.3402 MCEIPPSLFNISSLKALDLQKNNLNGSLPISMSNETLLEGLILSWNYFTGEIPSFIWNMPSLRFVGLCMNYLKGNLPNEMCHQLPLLEFFDVNGNKLDGSIPESISNCTSLKKLYLDSNSFTGFIPKDIGNLIKLEVLDLGSNNLSGSIPSNIFNISTLTRLYLGHNSFFGHLPSYLGIGFPKMKQLYLDENELTGQIPNSISNASKLIQLALSLNKFSGAIPNEIGSLTNLIELALDGNDLTGLIPETVRKLNRLQSLSLSNNRLQGSIINEFCQLKSLSELYLANNKFSGVLPECLGNTYLQKMDLSSNKLISRIPSSLWNLRDILFLDISSNALSGKISPEVSNLRAITLLNLSRNQISGSIPTTMGGLQTLVTLSLAYNKLQGSIPKSFSGMISMESMDLSHNYLSGVIPKSLESLLHLKYINLSYNLLHGEIPNGGPFQNFTAQSFMINKDLCGKSQLQVQPCSKGNKRMSNKVMLIIKCSLPIMVVILVVSGIVLLKLKRDNDNHSTKRDSINLDTPIKISYYELLQGTNGFDESNLLGSGSFGSIYKAILSNEEIYAVKVFNLDMEEAFRSFDIECVAMCNLRHRNIIKIISSCSNDHFKSLIMEFMDNGSLDRWLYSNNYYLDVLQRMNIMIDVASALEYLHHGSSILFVHCDVKPSNVLLDKDMVAHLSDFGISKLFGERQLEIYTKTLATIGYMAPEHGLEGVVSAKGDVYSYGILLMEIFTRKKPTDEMFFQGLSLKEWVSKSTPHSIINIIDVNLLQRENEKNYDVLPHMSSVFELALNCCIELPEARLTMIDVVVSLKKILALLMENIRGTTS 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1671 826 Pfam Leucine rich repeat 231 290 IPR001611 GO:0005515
Mibi03g1671 826 Pfam Leucine rich repeat 374 433 IPR001611 GO:0005515
Mibi03g1671 826 Pfam Leucine rich repeat 110 168 IPR001611 GO:0005515
Mibi03g1671 826 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 614 822 - -
Mibi03g1671 826 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 179 - -
Mibi03g1671 826 Gene3D Ribonuclease Inhibitor 2 179 IPR032675 -
Mibi03g1671 826 Gene3D Ribonuclease Inhibitor 180 470 IPR032675 -
Mibi03g1671 826 ProSitePatterns Protein kinases ATP-binding region signature. 544 566 IPR017441 GO:0005524
Mibi03g1671 826 PANTHER OS04G0122200 PROTEIN 219 813 - -
Mibi03g1671 826 Gene3D Phosphorylase Kinase; domain 1 500 613 - -
Mibi03g1671 826 SMART serkin_6 538 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1671 826 ProSiteProfiles Protein kinase domain profile. 538 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1671 826 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 180 472 - -
Mibi03g1671 826 Gene3D Transferase(Phosphotransferase) domain 1 614 821 - -
Mibi03g1671 826 SUPERFAMILY L domain-like 203 460 - -
Mibi03g1671 826 SUPERFAMILY Protein kinase-like (PK-like) 512 810 IPR011009 -
Mibi03g1671 826 SMART LRR_typ_2 181 205 IPR003591 -
Mibi03g1671 826 SMART LRR_typ_2 229 252 IPR003591 -
Mibi03g1671 826 SMART LRR_typ_2 132 156 IPR003591 -
Mibi03g1671 826 SMART LRR_typ_2 277 300 IPR003591 -
Mibi03g1671 826 SMART LRR_typ_2 253 276 IPR003591 -
Mibi03g1671 826 SMART LRR_typ_2 396 419 IPR003591 -
Mibi03g1671 826 SMART LRR_typ_2 420 444 IPR003591 -
Mibi03g1671 826 SMART LRR_typ_2 84 108 IPR003591 -
Mibi03g1671 826 SMART LRR_typ_2 348 372 IPR003591 -
Mibi03g1671 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Mibi03g1671 826 Pfam Protein kinase domain 539 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1671 826 SUPERFAMILY RNI-like 4 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1671 Mibi-ChrMibi03 45851349 45864685 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1671 4 824 Receptor kinase-like Gene Family AT3G47570 35.560 3.24e-160 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi03g1671 Pkinase 4.7e-44 CL0016