Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1645 ATGCAGATTTTGTTATTGAATTTCAACTCAGATCAGCCTGTTACGCAACAGCCCGTCCAAGAAGAAGGAAAGAACATGGAGAAAGGTGCACAACAGAATGGACATGCAACGATCCGTCCTATCGTTTCTCAGTTCAATGGAGTGGATGACGCAGACATGGCTAATGTCATTGCTCACTATCTTGACAGTATATCTCACATTAGATCTCATTTCTTAGGTTATCCAACTAATCTAGACTTCAACTACGATGAATTGGTGCAGTTACTTCGTTTCCACTTGAACAATGCTGGCGATCCATTTATAGGAAGCAGTTATTCGCTAAACTCAAATCCATTTGAGTTATGGGTACTTGATTGGTTTGCCAAACTATGGAAAATAGAGAAGAATGAGTACTGGGGATATGTTACGACTGGTGGAACTGAAGGAAATTTCCACGGCGTTTTAGTAGGGAGGGAACTATATCCCGATGGAATTATTTACACATCACGTGACTCACATTATTCAGTATTGAAAGTAGCAAGACTTCTTCGAGTCAAGTGTGTGGTAGTTGGGACTCTGATCTCAGGTGAAATTGATTATGTTGAATTAAAGGAGTCACTTCTTGCAAACAAGGACAAGCCTGCCATAATCAGCCTAAACATAGGGACTACGGTAAAGGGAGCCATTGATGACCTTGATCTTGTACTACAATCACTTGAGGAGTGTGGTTTTACTCAAGATCGATTCTACATCCATTGTGATGCAGCACTATTTGGAATGATGGTACCTTTTGATGTTGGAGCACCGGATATTTCTTTCAAGAAACCTATTGGAAGCTTGACTATTTCAGGGCACAAGTTTTTGGGTTGTCCAATGCCTTGTGGCATTCTTATAACTCGTTTAAAACACATTGATTTTCTCTCTAGTGAAGTTGAGTACATTGCATCAAAAGACACCACAATCTCAGGAAGTCGAGGAGGCCATGCTCCTATCTTTATTTGGTATGCTCTCAACAAGAAAGGCTTCAACGGCCTTCAAAAAGAAGTTCAAGAGTGCATCAAGAAGGCAGTCTACCTTCGAGACCGCTTGAGAGACCACGGCATTGGAGCTTTTCTAAACAAGTTTAGCAACACTGTGGTGTTTGAGAGGCCTCAAGATGAAGAGTTTGCTCGCAAATGGAGTTTGGCTAACAAAGGGAATATATCACATGTGGTGGTGATGCAACATGTGTCGCTGCAAATGTTAGACTCATTTGTAAGTGAGTTTGTGAAGAATCGATCTGCTTGGTACCAAGATGACAATAGGCAAATGCAGCCTCCTTGCGTTGCTGATGATATTGGTGCTGAGAATTGTGCTTGTGCTTTTCACAAGTCGTTGATTTCAGGATAA 1368 0.4137 MQILLLNFNSDQPVTQQPVQEEGKNMEKGAQQNGHATIRPIVSQFNGVDDADMANVIAHYLDSISHIRSHFLGYPTNLDFNYDELVQLLRFHLNNAGDPFIGSSYSLNSNPFELWVLDWFAKLWKIEKNEYWGYVTTGGTEGNFHGVLVGRELYPDGIIYTSRDSHYSVLKVARLLRVKCVVVGTLISGEIDYVELKESLLANKDKPAIISLNIGTTVKGAIDDLDLVLQSLEECGFTQDRFYIHCDAALFGMMVPFDVGAPDISFKKPIGSLTISGHKFLGCPMPCGILITRLKHIDFLSSEVEYIASKDTTISGSRGGHAPIFIWYALNKKGFNGLQKEVQECIKKAVYLRDRLRDHGIGAFLNKFSNTVVFERPQDEEFARKWSLANKGNISHVVVMQHVSLQMLDSFVSEFVKNRSAWYQDDNRQMQPPCVADDIGAENCACAFHKSLISG 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1645 455 Pfam Pyridoxal-dependent decarboxylase conserved domain 157 360 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mibi03g1645 455 MobiDBLite consensus disorder prediction 9 32 - -
Mibi03g1645 455 SUPERFAMILY PLP-dependent transferases 64 417 IPR015424 -
Mibi03g1645 455 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 272 293 IPR021115 GO:0016831
Mibi03g1645 455 Gene3D - 104 319 IPR015421 GO:0003824
Mibi03g1645 455 PANTHER - 43 450 - -
Mibi03g1645 455 Gene3D Aspartate Aminotransferase, domain 1 324 419 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1645 Mibi-ChrMibi03 45083622 45086993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1645 214 354 Calmodulin-binding Proteins AT1G65960 27.097 1.04e-08 55.1