Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1632 ATGAATAATAAGGGGAAGGTTCATGAATGTTCCATATGCAGTTCAGAATTCACGTCGAGCCAGGCATTGGGTGGCCACATGAGAAGGCATTGCCTATCCATGGCCGCCCTCCCTCCTTCTGCGGTGACTTGTGAAGATGCCACGACGGAGGCCATGGTGGCTGTAGTAAAGCCAAAAGTGCTGTCTTTGGATCTAAACCTGCCGGCCCCGGAGGAGGATTCCAAATTTGATCAGTTGACGGCGGTGGTGACAGCTAAAACGAAACCATTGATGCTGTCTGCTTCTCCTTCTTTGGTTGGATGCCATTATTAG 312 0.5032 MNNKGKVHECSICSSEFTSSQALGGHMRRHCLSMAALPPSAVTCEDATTEAMVAVVKPKVLSLDLNLPAPEEDSKFDQLTAVVTAKTKPLMLSASPSLVGCHY 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1632 103 ProSiteProfiles Zinc finger C2H2 type domain profile. 8 30 IPR013087 -
Mibi03g1632 103 PANTHER ZINC FINGER PROTEIN ZAT5 3 75 - -
Mibi03g1632 103 SUPERFAMILY beta-beta-alpha zinc fingers 5 31 IPR036236 -
Mibi03g1632 103 ProSitePatterns Zinc finger C2H2 type domain signature. 10 30 IPR013087 -
Mibi03g1632 103 Gene3D Classic Zinc Finger 1 49 - -
Mibi03g1632 103 Pfam C2H2-type zinc finger 7 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1632 Mibi-ChrMibi03 44045546 44045857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1632 1 103 C2H2 Transcription Factor Family AT2G28200 44.643 1.36e-25 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi03g1632 zf-C2H2_6 5e-09 CL0361