Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1613 ATGTTAAATTTTGAGGTCAAGCTCCGTCTTGGTTTCATACAACGTTGTCGTCGTCATGTTTCTCATGCTATTGATGTTCCATTTACACCTCTTTCTTCCCATTACATCTCGATGAAGGAGTTTTTTGAGAATGGTTCAAGTTTCTTACGATCAAACCTTTCTCATTATTTGTTCCCACGTGAAATGCTTGATCAATTGATACCTAATATCATCGACCATACTCGAAGATGGCACAATGACAATCATAATAATCTTCCTTGTCGTTTTGAAGATGGTTTCGTCGCAATTCCTCTAGCTATTGAGATTATCGTTGAATTGCACGAGAATGTCAATCTCGAAGATGTTGTGGATCAAACAGAAGAGATAAATATGACTCCAACAAGTGAAGAAGTTGTTCGATCACTGGACAAAACGAAGTTTCAGGAAGCTATTGAAACCAATGAGAAGAATGATTATTGTTGTATTTGTCTTGAATATTTTTGTGACAATGTAGATGTTTCAATTCTGCCGTGTAAACATGCTTTTCACCATGATTGTATTGTGCAGTGGCTGAAAACTAGCCATTTATGTCCTTTATGTCGATATTCGTTGCCAGTATGTATGTAG 606 0.3663 MLNFEVKLRLGFIQRCRRHVSHAIDVPFTPLSSHYISMKEFFENGSSFLRSNLSHYLFPREMLDQLIPNIIDHTRRWHNDNHNNLPCRFEDGFVAIPLAIEIIVELHENVNLEDVVDQTEEINMTPTSEEVVRSLDKTKFQEAIETNEKNDYCCICLEYFCDNVDVSILPCKHAFHHDCIVQWLKTSHLCPLCRYSLPVCM 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1613 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 200 IPR013083 -
Mibi03g1613 201 ProSiteProfiles Zinc finger RING-type profile. 153 194 IPR001841 -
Mibi03g1613 201 PANTHER TARGET OF ERK KINASE MPK-1 57 197 - -
Mibi03g1613 201 SUPERFAMILY RING/U-box 141 199 - -
Mibi03g1613 201 SMART ring_2 153 193 IPR001841 -
Mibi03g1613 201 Pfam Ring finger domain 152 194 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1613 Mibi-ChrMibi03 43302305 43302910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1613 116 198 C3H Transcription Factor Family AT1G18760 38.554 1.51e-16 73.2