Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1612 ATGGCAGATAGCTTAGTTAGTTTCGTGCTAGAGAACCTGTCTCGGCTAGTGGCACATGAGGCACATTTGCTCTGTGGTGTGGATGACAAAGTGAAGGCTCTAGAGAGTGAGCTCAAAATGATGTCTCTCTTCCTTAAAAGCTGTGATCAAAACCAGAGGAAGAAGGAAATCGAACAAGAGTTTGTGCGTCAAATCACAGAAGTAGCACATGAAGCAGAGGATGTCATTGACACTTTTGTTGCCAACGTTGTCCACCATCGAAGGAGAATTTGGTTGTCAAGGATGTTACATGTTATTGACCATGCAAAGCTTCTGCACCATATTGCAGAGAAAATAGACAACATTAGAGTTACCATCAATCAGATTTATGAGAACAGAATCAAATATGACATCAAGGAAGAAGATGCAGGATCTTCAACAGAGGAGTCACAACTAATGCACAAGAGAAGAAGAGAGGTGGAGGAAGATGATGTGGTGGGATTTCAGCATGATACAACTCAAGTAATCAATCGCTTCAAACAAGGAGGTTCGCATCGTAATGTGGTGTCCATCATTGGTATGGGTGGATTAGGTAAAACTACTCTTGCTCGCAAGGTTTATAATAGTCCTCATGTCAAGGATTACTTTGACTGTCATGCTTGGGTTTATGTTTCTAATGACTATAGACCTATAGAACTTTTGCATGCCCTTCTTAAATGCTTGATCACCATCTCTGCAAACACATGTTATTACAATGAGAATAACAGTAACAAGCGTAACCAGAAATCAAAGGGCAAAGCCAAAGCAGAATCTGATGATTTTTATAATTTGAGTGAGGAGGAATTGAGAGACAAGGTACGAGAGTGTTTGAAGGGGAAGAGGTATCTTGTAGTTTTGGATGACATATGGAATCCTCAACATTGGGAAGACTTGCAGTATGCTTTCCCTGATGACAATAACGGCAGTAGGATCCTGATTACTAGTCGCGTGAAAGAGGTTGCTTCTCATGCTAGCTCATTTCCCCCCTACTATCTCCCTTTTCTTAGTGAAGATCAAAGTTGGGAGCTATTCTCAAAAACAGTGTTTCGAGGAGAAGCTGTGCCTACTGATCTAAAGCAATTGGGTAAGTGCATGGTAAAAAGTTGTGGCGGCTTGCCATTATCCATTGTGGTACTTGCAGGAATTCTAGCTAACAAGGAGAAGTCATCCCGAGAATGGTCTAAGATCATGGGCCATGTCAACTTGTATCTCACTCGACCAGGAACAAAAGTACACCAAATAGTACTTAAACTTAGTTATGATAGCTTGCCAACAAGATTGAGGTCATGCTTTCTATATTTCGGTATGTTTCCTGAAGACTATGAGATTCCTGTTAGACGTTTGATTCAATTATGGGTTGCTGAAGGATTTATTTATCAAAGTGATTCAAGAACTGAAGAGAATGTTGCAGAGGAGTACTTGGATGAACTCATTGACCGTAGTTTAGTCCAAGTAGGGAGGAGGAGAAGTGATGGGGGAATCAAATCATGTCGTATCCATGATCTTCTGAGAGAACTCTGCATATCTGAGAGCAAGGAAGAGAAGGCTTTTGAAATTTGTAGGGATGTAGACATTTTGCAGCAAACCAAACCTCGGAGGCTATCCATTCAATGTAATATGTCTGATTACTTAACTTCAAGCAACAAAGACCATTCACATACTCGTTCTGTGCTATGTTTTCACTGCGACTCCTACTACCACCTTGATTCAAGAGAGTCAACAAAAAGGCTTGTGAAATGGTTTAAACTTGTTCGAGTTTTAGATCTAGGGGTTCCGGTATTTTGTAAGGATAAGATCCCAACCGATTTAAACATGTTAGTGTATCTAAGGTACTTGAGAATAGACATACACAGGAGTCTTACCAACCTCAGAATTTTGAAACTGTGGTTTTGTGAGGTTAGAAAAGCCTCAAGTAGTTCTGAGTTAAAGCTTTGTTGCATTAATGGGTTCCCCCAACTAGAGGTATTTCAAATGCAATATCTGAGGAAGGTCTATTGCTGGGAATTAGGTAAAGATGTAATGCCATATCTTAGACGTTTGATCATTGTAAAGTGTGGTAGGTTGATTGGTCTCCCTGATGAGCTCTGGTCACTCTCTTACTTAAGAGAGGTGCACGTAGAAAAGCCTTCTGATTCACTGATGATGCAACTCCGAAGTCAAACCATAAGGGATGGATGCAATCTCATTATCTCTTAA 2214 0.4051 MADSLVSFVLENLSRLVAHEAHLLCGVDDKVKALESELKMMSLFLKSCDQNQRKKEIEQEFVRQITEVAHEAEDVIDTFVANVVHHRRRIWLSRMLHVIDHAKLLHHIAEKIDNIRVTINQIYENRIKYDIKEEDAGSSTEESQLMHKRRREVEEDDVVGFQHDTTQVINRFKQGGSHRNVVSIIGMGGLGKTTLARKVYNSPHVKDYFDCHAWVYVSNDYRPIELLHALLKCLITISANTCYYNENNSNKRNQKSKGKAKAESDDFYNLSEEELRDKVRECLKGKRYLVVLDDIWNPQHWEDLQYAFPDDNNGSRILITSRVKEVASHASSFPPYYLPFLSEDQSWELFSKTVFRGEAVPTDLKQLGKCMVKSCGGLPLSIVVLAGILANKEKSSREWSKIMGHVNLYLTRPGTKVHQIVLKLSYDSLPTRLRSCFLYFGMFPEDYEIPVRRLIQLWVAEGFIYQSDSRTEENVAEEYLDELIDRSLVQVGRRRSDGGIKSCRIHDLLRELCISESKEEKAFEICRDVDILQQTKPRRLSIQCNMSDYLTSSNKDHSHTRSVLCFHCDSYYHLDSRESTKRLVKWFKLVRVLDLGVPVFCKDKIPTDLNMLVYLRYLRIDIHRSLTNLRILKLWFCEVRKASSSSELKLCCINGFPQLEVFQMQYLRKVYCWELGKDVMPYLRRLIIVKCGRLIGLPDELWSLSYLREVHVEKPSDSLMMQLRSQTIRDGCNLIIS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1612 737 Pfam Rx N-terminal domain 5 88 IPR041118 -
Mibi03g1612 737 FunFam Probable disease resistance protein At1g61300 140 332 - -
Mibi03g1612 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 440 IPR027417 -
Mibi03g1612 737 CDD RX-CC_like 2 122 IPR038005 -
Mibi03g1612 737 Gene3D - 340 425 IPR042197 -
Mibi03g1612 737 Pfam NB-ARC domain 165 407 IPR002182 GO:0043531
Mibi03g1612 737 Gene3D - 426 516 IPR036388 -
Mibi03g1612 737 Gene3D - 136 332 IPR027417 -
Mibi03g1612 737 FunFam Probable disease resistance protein At1g63360 426 515 - -
Mibi03g1612 737 PRINTS Disease resistance protein signature 375 389 - -
Mibi03g1612 737 PRINTS Disease resistance protein signature 624 640 - -
Mibi03g1612 737 PRINTS Disease resistance protein signature 181 196 - -
Mibi03g1612 737 SUPERFAMILY L domain-like 496 712 - -
Mibi03g1612 737 Gene3D - 5 109 - -
Mibi03g1612 737 Gene3D Ribonuclease Inhibitor 530 728 IPR032675 -
Mibi03g1612 737 PANTHER DISEASE RESISTANCE PROTEIN RP 27 717 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1612 Mibi-ChrMibi03 43283978 43286695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1612 182 512 WRKY Transcription Factor Family AT5G45050 25.680 7.79e-11 63.9